RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 RPL32P62910 135 aaKnown RBP4.05□□□□□ -1.76
CDH8-206ENST00000580044 RPL24P83731 157 aaKnown RBP4.05□□□□□ -1.76
CDH8-206ENST00000580044 NDPQ00604 133 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 FOXI2Q6ZQN5 318 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 GTSCR1Q86UQ5 136 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 Q8N9W7 124 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 PHLDA1Q8WV24 401 aaPredicted RBP4.05□□□□□ -1.76
CDH8-206ENST00000580044 TOMM6Q96B49 74 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 LINC00477Q96M19 166 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 HIST1H4GQ99525 98 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 AGPAT4-IT1Q9H0P7 198 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 TMEM160Q9NX00 188 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 MSRB1Q9NZV6 116 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 UFC1Q9Y3C8 167 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 CHTOPQ9Y3Y2 248 aaKnown RBP4.05□□□□□ -1.76
CDH8-206ENST00000580044 S4R3C0 116 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 SPEGQ15772 3267 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 SVILO95425 2214 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 WDFY3Q8IZQ1 3526 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 TRAV21A0A0B4J279 112 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 TRAV40A0A0B4J280 105 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 IGKV3D-20A0A0C4DH25 116 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 MYMXA0A1B0GTQ4 84 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 H3BUA1 57 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 BRI3O95415 125 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 IGHV3-23P01764 117 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 ASIPP42127 132 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 CRIP2P52943 208 aaPredicted RBP4.04□□□□□ -1.76
CDH8-206ENST00000580044 FXYD7P58549 80 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 HERVK_113P61574 105 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 SUMO2P61956 95 aaKnown RBP4.04□□□□□ -1.76
CDH8-206ENST00000580044 PRB3Q04118 309 aaPredicted RBP4.04□□□□□ -1.76
CDH8-206ENST00000580044 ATP5G2Q06055 141 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 ERCC8Q13216 396 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 KLRD1Q13241 179 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 SCGB2A2Q13296 93 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 RRN3P1Q2M238 152 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 C12orf74Q32Q52 190 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 CD300EQ496F6 205 aaPredicted RBP4.04□□□□□ -1.76
CDH8-206ENST00000580044 C11orf71Q6IPW1 123 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 OR10J6PQ8NGY7 276 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 ATP6V0E2Q8NHE4 81 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 SCGB3A1Q96QR1 104 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 SIGMAR1Q99720 223 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 SIRPDQ9H106 197 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 VCX2Q9H322 139 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 DPH3P1Q9H4G8 78 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 MRPL35Q9NZE8 188 aaKnown RBP4.04□□□□□ -1.76
CDH8-206ENST00000580044 ICE1Q9Y2F5 2266 aa4.04□□□□□ -1.76
CDH8-206ENST00000580044 TRGV11A0A075B6L2 103 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 TRBV7-3A0A075B6L6 115 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 TRAV8-2A0A0B4J237 113 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 A0A1B0GV72 72 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 DNAJC9-AS1A6NH13 148 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 PRAC2D3DTV9 90 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 K7ENP7 123 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 ATP6V0E1O15342 81 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 TRGV3P03979 118 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 HLA-DMBP28068 263 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 UCNP55089 124 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 RIPPLY3P57055 190 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 ECSCRQ19T08 205 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 MTURNQ8N3F0 131 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 RNF182Q8N6D2 247 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 LINC01560Q8TB33 94 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 DLX4Q92988 240 aaPredicted RBP4.03□□□□□ -1.76
CDH8-206ENST00000580044 SPANXB1Q9NS25 103 aaPredicted RBP4.03□□□□□ -1.76
CDH8-206ENST00000580044 MOB4Q9Y3A3 225 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 FREM2Q5SZK8 3169 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 NCOR1O75376 2440 aa4.03□□□□□ -1.76
CDH8-206ENST00000580044 FRYLO94915 3013 aa4.03□□□□□ -1.77
CDH8-206ENST00000580044 URB1O60287 2271 aaKnown RBP4.02□□□□□ -1.77
CDH8-206ENST00000580044 GPR179Q6PRD1 2367 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 TEX48A0A1B0GUV7 120 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 CLPSL1A2RUU4 121 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 H3BVH4 76 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 K7ERJ3 54 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 NDUFA4O00483 81 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 CCL21O00585 134 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 NXPH4O95158 308 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 S100A4P26447 101 aaKnown RBP4.02□□□□□ -1.77
CDH8-206ENST00000580044 TCTAP57738 103 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 POM121L12Q8N7R1 296 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 NEXN-AS1Q8NBZ9 246 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 GLMPQ8WWB7 406 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 ITLN2Q8WWU7 325 aaPredicted RBP4.02□□□□□ -1.77
CDH8-206ENST00000580044 TMEM141Q96I45 108 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 NAA38Q9BRA0 125 aaKnown RBP4.02□□□□□ -1.77
CDH8-206ENST00000580044 KLK15Q9H2R5 256 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
CDH8-206ENST00000580044 PHLDA3Q9Y5J5 127 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 MYO15AQ9UKN7 3530 aa4.02□□□□□ -1.77
CDH8-206ENST00000580044 BDP1A6H8Y1 2624 aa4.01□□□□□ -1.77
CDH8-206ENST00000580044 TRBV20-1A0A075B6N2 111 aa4.01□□□□□ -1.77
CDH8-206ENST00000580044 TRAV41A0A0B4J266 112 aa4.01□□□□□ -1.77
CDH8-206ENST00000580044 H3BMG7 143 aa4.01□□□□□ -1.77
CDH8-206ENST00000580044 LGALS1P09382 135 aaKnown RBP4.01□□□□□ -1.77
CDH8-206ENST00000580044 GATA1P15976 413 aaPredicted RBP4.01□□□□□ -1.77
CDH8-206ENST00000580044 PPIFP30405 207 aaKnown RBP4.01□□□□□ -1.77
CDH8-206ENST00000580044 SAA4P35542 130 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms