RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 MAP1LC3AQ9H492 121 aa13.32□□□□□ -0.28
ERBB2-205ENST00000578199 IGLV1-40P01703 118 aa13.32□□□□□ -0.28
ERBB2-205ENST00000578199 DEFB112Q30KQ8 113 aa13.32□□□□□ -0.28
ERBB2-205ENST00000578199 RHPN1-AS1Q9BWJ2 59 aa13.32□□□□□ -0.28
ERBB2-205ENST00000578199 LRRK2Q5S007 2527 aa13.31□□□□□ -0.28
ERBB2-205ENST00000578199 DOPEY2Q9Y3R5 2298 aa13.31□□□□□ -0.28
ERBB2-205ENST00000578199 A1L4Q6 167 aa13.31□□□□□ -0.28
ERBB2-205ENST00000578199 SPANXN1Q5VSR9 72 aa13.31□□□□□ -0.28
ERBB2-205ENST00000578199 NUDT3O95989 172 aa13.3□□□□□ -0.28
ERBB2-205ENST00000578199 PPBPP02775 128 aa13.3□□□□□ -0.28
ERBB2-205ENST00000578199 LEPP41159 167 aa13.3□□□□□ -0.28
ERBB2-205ENST00000578199 ZFAND2AQ8N6M9 145 aa13.3□□□□□ -0.28
ERBB2-205ENST00000578199 IFI27L1Q96BM0 104 aa13.3□□□□□ -0.28
ERBB2-205ENST00000578199 OR10J6PQ8NGY7 276 aa13.3□□□□□ -0.28
ERBB2-205ENST00000578199 H3BUA1 57 aa13.29□□□□□ -0.28
ERBB2-205ENST00000578199 WFDC12Q8WWY7 111 aa13.29□□□□□ -0.28
ERBB2-205ENST00000578199 ERASQ7Z444 233 aa13.29□□□□□ -0.28
ERBB2-205ENST00000578199 BBC3Q96PG8 261 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-205ENST00000578199 MS4A6AQ9H2W1 248 aa13.29□□□□□ -0.28
ERBB2-205ENST00000578199 DKK2Q9UBU2 259 aa13.29□□□□□ -0.28
ERBB2-205ENST00000578199 RNASE4P34096 147 aaKnown RBP13.28□□□□□ -0.28
ERBB2-205ENST00000578199 CFHR3Q02985 330 aa13.28□□□□□ -0.28
ERBB2-205ENST00000578199 ZNF469Q96JG9 3925 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-205ENST00000578199 TGFAP01135 160 aa13.28□□□□□ -0.28
ERBB2-205ENST00000578199 SMIM15Q7Z3B0 74 aa13.28□□□□□ -0.28
ERBB2-205ENST00000578199 LINC00477Q96M19 166 aa13.28□□□□□ -0.28
ERBB2-205ENST00000578199 COX11Q9Y6N1 276 aa13.28□□□□□ -0.28
ERBB2-205ENST00000578199 A0A0G2JLM5 398 aa13.27□□□□□ -0.29
ERBB2-205ENST00000578199 OR2K2Q8NGT1 345 aa13.27□□□□□ -0.29
ERBB2-205ENST00000578199 TMEM8BA6NDV4 472 aa13.27□□□□□ -0.29
ERBB2-205ENST00000578199 M0R381 172 aa13.27□□□□□ -0.29
ERBB2-205ENST00000578199 BRI3O95415 125 aa13.27□□□□□ -0.29
ERBB2-205ENST00000578199 LGALS9BQ3B8N2 356 aa13.27□□□□□ -0.29
ERBB2-205ENST00000578199 LGALS9CQ6DKI2 356 aa13.27□□□□□ -0.29
ERBB2-205ENST00000578199 DAZ1Q9NQZ3 744 aaKnown RBP13.27□□□□□ -0.29
ERBB2-205ENST00000578199 COX8AP10176 69 aa13.26□□□□□ -0.29
ERBB2-205ENST00000578199 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
ERBB2-205ENST00000578199 CBY3A6NI87 242 aa13.26□□□□□ -0.29
ERBB2-205ENST00000578199 OVOL1O14753 267 aa13.26□□□□□ -0.29
ERBB2-205ENST00000578199 GNRH2O43555 120 aa13.26□□□□□ -0.29
ERBB2-205ENST00000578199 ANXA2RQ3ZCQ2 193 aa13.26□□□□□ -0.29
ERBB2-205ENST00000578199 TMEM158Q8WZ71 300 aa13.26□□□□□ -0.29
ERBB2-205ENST00000578199 ABCA12Q86UK0 2595 aa13.25□□□□□ -0.29
ERBB2-205ENST00000578199 TEX15Q9BXT5 2789 aa13.25□□□□□ -0.29
ERBB2-205ENST00000578199 BVES-AS1Q5T3Y7 98 aa13.25□□□□□ -0.29
ERBB2-205ENST00000578199 NRACQ8N912 160 aa13.25□□□□□ -0.29
ERBB2-205ENST00000578199 LINC01356Q8N9X3 169 aa13.25□□□□□ -0.29
ERBB2-205ENST00000578199 IGLV2-18A0A075B6J9 118 aa13.24□□□□□ -0.29
ERBB2-205ENST00000578199 C2orf91Q6ZV80 131 aa13.24□□□□□ -0.29
ERBB2-205ENST00000578199 NXT2Q9NPJ8 142 aaKnown RBP13.24□□□□□ -0.29
ERBB2-205ENST00000578199 SMPXQ9UHP9 88 aa13.24□□□□□ -0.29
ERBB2-205ENST00000578199 CHTOPQ9Y3Y2 248 aaKnown RBP13.24□□□□□ -0.29
ERBB2-205ENST00000578199 FCER1GP30273 86 aa13.24□□□□□ -0.29
ERBB2-205ENST00000578199 OR4C5Q8NGB2 326 aa13.24□□□□□ -0.29
ERBB2-205ENST00000578199 LENEPQ9Y5L5 61 aa13.24□□□□□ -0.29
ERBB2-205ENST00000578199 PTPN13Q12923 2485 aa13.24□□□□□ -0.29
ERBB2-205ENST00000578199 NBPF19A0A087WUL8 3843 aa13.24□□□□□ -0.29
ERBB2-205ENST00000578199 A0A096LNT2 108 aa13.23□□□□□ -0.29
ERBB2-205ENST00000578199 TRAV21A0A0B4J279 112 aa13.23□□□□□ -0.29
ERBB2-205ENST00000578199 S100A4P26447 101 aaKnown RBP13.23□□□□□ -0.29
ERBB2-205ENST00000578199 PSMB8P28062 276 aa13.23□□□□□ -0.29
ERBB2-205ENST00000578199 SRSF1Q07955 248 aaKnown RBP eCLIP13.23□□□□□ -0.29
ERBB2-205ENST00000578199 UBR5O95071 2799 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-205ENST00000578199 RNF223E7ERA6 249 aa13.23□□□□□ -0.29
ERBB2-205ENST00000578199 KRTAP10-9P60411 292 aa13.23□□□□□ -0.29
ERBB2-205ENST00000578199 Q8N8P6 123 aa13.23□□□□□ -0.29
ERBB2-205ENST00000578199 VPS25Q9BRG1 176 aa13.23□□□□□ -0.29
ERBB2-205ENST00000578199 LINC01546A6NGU7 62 aa13.22□□□□□ -0.29
ERBB2-205ENST00000578199 IGHV4-4A0A075B6R2 117 aa13.22□□□□□ -0.29
ERBB2-205ENST00000578199 PRSS1P07477 247 aa13.22□□□□□ -0.29
ERBB2-205ENST00000578199 FGF6P10767 208 aa13.22□□□□□ -0.29
ERBB2-205ENST00000578199 SLC25A16P16260 332 aa13.22□□□□□ -0.29
ERBB2-205ENST00000578199 GATA3P23771 443 aa13.22□□□□□ -0.29
ERBB2-205ENST00000578199 DSCR9P59020 149 aa13.22□□□□□ -0.29
ERBB2-205ENST00000578199 C14orf178Q8N769 122 aaPredicted RBP13.22□□□□□ -0.29
ERBB2-205ENST00000578199 FAM19A4Q96LR4 140 aa13.22□□□□□ -0.29
ERBB2-205ENST00000578199 CD5LO43866 347 aa13.21□□□□□ -0.29
ERBB2-205ENST00000578199 NMUP48645 174 aa13.2□□□□□ -0.3
ERBB2-205ENST00000578199 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
ERBB2-205ENST00000578199 PHLDA3Q9Y5J5 127 aa13.2□□□□□ -0.3
ERBB2-205ENST00000578199 COX6B1P14854 86 aa13.2□□□□□ -0.3
ERBB2-205ENST00000578199 ASIPP42127 132 aa13.2□□□□□ -0.3
ERBB2-205ENST00000578199 DUX5Q96PT3 197 aa13.2□□□□□ -0.3
ERBB2-205ENST00000578199 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
ERBB2-205ENST00000578199 SMIM17P0DL12 118 aa13.19□□□□□ -0.3
ERBB2-205ENST00000578199 SVIPQ8NHG7 77 aa13.19□□□□□ -0.3
ERBB2-205ENST00000578199 DCANP1Q8TF63 244 aa13.19□□□□□ -0.3
ERBB2-205ENST00000578199 SORL1Q92673 2214 aa13.19□□□□□ -0.3
ERBB2-205ENST00000578199 ODF1Q14990 250 aa13.19□□□□□ -0.3
ERBB2-205ENST00000578199 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
ERBB2-205ENST00000578199 FOXC2Q99958 501 aa13.19□□□□□ -0.3
ERBB2-205ENST00000578199 TAX1BP3O14907 124 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 IGKV3-20P01619 116 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 RNASE3P12724 160 aaKnown RBP13.18□□□□□ -0.3
ERBB2-205ENST00000578199 C12orf54Q6X4T0 127 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 MUC4Q99102 2169 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 TMEM238C9JI98 176 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 CIDEAO60543 219 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 ZNF688P0C7X2 276 aa13.18□□□□□ -0.3
ERBB2-205ENST00000578199 LAGE3Q14657 143 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 812 ms