RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 CHKB-CPT1BH3BT56 60 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 WIPF1O43516 503 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 C17orf58Q2M2W7 97 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 TAF1P21675 1872 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 TRAV7A0A075B6U4 112 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 IGKV1OR2-108A0A075B7D4 117 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 A0A087WVE0 104 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 TRGV1A0A0A0MS02 117 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 NDUFS5O43920 106 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 MYCNOSP40205 109 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 RHPN1-AS1Q9BWJ2 59 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 PROK2Q9HC23 129 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 CACNA1CQ13936 2221 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 TMEM223A0PJW6 202 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 IGLV2-14P01704 120 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 ZNF524Q96C55 264 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 SMCHD1A6NHR9 2005 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 BUB1B-PAK6H3BSN5 160 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 MED14OSP0DP75 135 aa3.42□□□□□ -1.86
CDH8-205ENST00000577730 IGHV3-38A0A0C4DH36 116 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 A6NED7 52 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 TEX22C9J3V5 150 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 CDK2AP2O75956 126 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 C20orf203Q8NBC4 194 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 LINC00311Q8N616 119 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 ODF3Q96PU9 254 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 PRO0461Q9UI25 63 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 FAM223BA6NKX1 122 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 CRIP2P52943 208 aaPredicted RBP3.41□□□□□ -1.86
CDH8-205ENST00000577730 FAM223AQ8IWN6 122 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 KLK9Q9UKQ9 250 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 GON4LQ3T8J9 2241 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 TRBV7-6A0A0J9YX20 115 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 PIK3CD-AS1Q5SR53 167 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 TPSG1Q9NRR2 321 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 A0A0G2JNJ9 132 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 Q9UFV3 132 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 HHLA3Q9XRX5 114 aa3.41□□□□□ -1.86
CDH8-205ENST00000577730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.4□□□□□ -1.86
CDH8-205ENST00000577730 IGKV2-29A2NJV5 120 aaPredicted RBP3.4□□□□□ -1.86
CDH8-205ENST00000577730 GNRH2O43555 120 aa3.4□□□□□ -1.86
CDH8-205ENST00000577730 ZMAT4Q9H898 229 aa3.4□□□□□ -1.86
CDH8-205ENST00000577730 ZNRD1Q9P1U0 126 aa3.4□□□□□ -1.86
CDH8-205ENST00000577730 IGHV3-53P01767 116 aa3.4□□□□□ -1.86
CDH8-205ENST00000577730 B3GALT5-AS1P59052 145 aa3.4□□□□□ -1.86
CDH8-205ENST00000577730 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.86
CDH8-205ENST00000577730 CITO14578 2027 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 A0A0G2JMZ2 1700 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 LRRC37A2A6NM11 1700 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 LRRC37AA6NMS7 1700 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 NUP205Q92621 2012 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 A0A1W2PRX2 142 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 NCR3O14931 201 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 SP5Q6BEB4 398 aaPredicted RBP3.4□□□□□ -1.87
CDH8-205ENST00000577730 COL4A1P02462 1669 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 FAM222AQ5U5X8 452 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 LINC00308Q8TCZ7 52 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 LOC285556D6RIA3 1793 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.4□□□□□ -1.87
CDH8-205ENST00000577730 PINLYPA6NC86 204 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 STHQ8IWL8 128 aa3.4□□□□□ -1.87
CDH8-205ENST00000577730 COL11A1P12107 1806 aaPredicted RBP3.39□□□□□ -1.87
CDH8-205ENST00000577730 CLPSL1A2RUU4 121 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 GNLYP22749 145 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 SMCPP49901 116 aaPredicted RBP3.39□□□□□ -1.87
CDH8-205ENST00000577730 SCN1AP35498 2009 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 NINQ8N4C6 2090 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 PRR19A6NJB7 356 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 C9orf106Q8NAJ2 232 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 I3L2K1 104 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 BPY2O14599 106 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 C11orf44Q8N8P7 122 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 RNF185Q96GF1 192 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 FGF23Q9GZV9 251 aaPredicted RBP3.39□□□□□ -1.87
CDH8-205ENST00000577730 A0A0J9YX75 114 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 IGKV1-17P01599 117 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 FAM27E3Q08E93 113 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 MINOS1Q5TGZ0 78 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 MINOS1-NBL1R4GNA1 71 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 STRCQ7RTU9 1775 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 GOLGA4Q13439 2230 aaKnown RBP3.39□□□□□ -1.87
CDH8-205ENST00000577730 ZNF638Q14966 1978 aaKnown RBP3.39□□□□□ -1.87
CDH8-205ENST00000577730 PLAC8L1A1L4L8 177 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 KRTAP27-1Q3LI81 207 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 USMG5Q96IX5 58 aa3.39□□□□□ -1.87
CDH8-205ENST00000577730 CHD5Q8TDI0 1954 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 TMEM178BH3BS89 294 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 Q6ZS46 218 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 MIR7-3HGQ8N6C7 128 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 TRIP11Q15643 1979 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 IGHV3-16A0A0C4DH30 117 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 OVOL3O00110 214 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 GATA4P43694 442 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 OTOFQ9HC10 1997 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 IGHV3OR16-10A0A075B7F0 116 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 IGHV4-28A0A0C4DH34 117 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 BSPH1Q075Z2 132 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 IGKV1D-37A0A075B6S9 117 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 ZNF80P51504 273 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms