RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 TWIST1Q15672 202 aa21.67■■□□□ 1.06
CTDNEP1-208ENST00000573600 TMEM256Q8N2U0 113 aa21.67■■□□□ 1.06
CTDNEP1-208ENST00000573600 HIST1H2BLQ99880 126 aa21.67■■□□□ 1.06
CTDNEP1-208ENST00000573600 HIVEP1P15822 2718 aa21.67■■□□□ 1.06
CTDNEP1-208ENST00000573600 MAST4O15021 2626 aa21.67■■□□□ 1.06
CTDNEP1-208ENST00000573600 FABP4P15090 132 aa21.66■■□□□ 1.06
CTDNEP1-208ENST00000573600 NTF3P20783 257 aa21.66■■□□□ 1.06
CTDNEP1-208ENST00000573600 NAGKQ9UJ70 344 aa21.66■■□□□ 1.06
CTDNEP1-208ENST00000573600 NSD1Q96L73 2696 aaPredicted RBP21.66■■□□□ 1.06
CTDNEP1-208ENST00000573600 FN1P02751 2386 aaKnown RBP21.66■■□□□ 1.06
CTDNEP1-208ENST00000573600 OR5AL1P0C617 328 aa21.66■■□□□ 1.06
CTDNEP1-208ENST00000573600 ESDP10768 282 aa21.66■■□□□ 1.06
CTDNEP1-208ENST00000573600 KIR3DS1Q14943 382 aa21.66■■□□□ 1.06
CTDNEP1-208ENST00000573600 TMEM18Q96B42 140 aa21.65■■□□□ 1.06
CTDNEP1-208ENST00000573600 C7orf71A4D174 169 aa21.64■■□□□ 1.06
CTDNEP1-208ENST00000573600 SNAI2O43623 268 aa21.64■■□□□ 1.06
CTDNEP1-208ENST00000573600 CDKN1BP46527 198 aa21.64■■□□□ 1.06
CTDNEP1-208ENST00000573600 C18orf32Q8TCD1 76 aa21.64■■□□□ 1.06
CTDNEP1-208ENST00000573600 MAP6D1Q9H9H5 199 aa21.64■■□□□ 1.06
CTDNEP1-208ENST00000573600 ZNF256Q9Y2P7 627 aaPredicted RBP21.64■■□□□ 1.06
CTDNEP1-208ENST00000573600 MUC21A0A0G2JKD1 596 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 MUC21A0A140T8X8 626 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 HLA-DRB4P13762 266 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 ANXA2RQ3ZCQ2 193 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 MUC21Q5SSG8 566 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 LINC00518Q8N0U6 118 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 HLA-DRB4X5D2U9 266 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 SERF1AO75920 110 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 IGKV3-20P01619 116 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 AMBPP02760 352 aa21.63■■□□□ 1.05
CTDNEP1-208ENST00000573600 A8MTW9 85 aa21.62■■□□□ 1.05
CTDNEP1-208ENST00000573600 MED14OSP0DP75 135 aa21.62■■□□□ 1.05
CTDNEP1-208ENST00000573600 ASIPP42127 132 aa21.62■■□□□ 1.05
CTDNEP1-208ENST00000573600 SSTP61278 116 aa21.62■■□□□ 1.05
CTDNEP1-208ENST00000573600 CACNG7P62955 275 aa21.62■■□□□ 1.05
CTDNEP1-208ENST00000573600 DNLZQ5SXM8 178 aa21.62■■□□□ 1.05
CTDNEP1-208ENST00000573600 OR10D4PQ8NGN7 298 aa21.62■■□□□ 1.05
CTDNEP1-208ENST00000573600 PACRGQ96M98 296 aaPredicted RBP21.62■■□□□ 1.05
CTDNEP1-208ENST00000573600 FAM104BQ5XKR9 115 aa21.61■■□□□ 1.05
CTDNEP1-208ENST00000573600 AMTNQ6UX39 209 aa21.61■■□□□ 1.05
CTDNEP1-208ENST00000573600 KCNS1Q96KK3 526 aa21.61■■□□□ 1.05
CTDNEP1-208ENST00000573600 TMEM191AQ9H0A3 160 aa21.61■■□□□ 1.05
CTDNEP1-208ENST00000573600 KNCNA6PVL3 124 aa21.6■■□□□ 1.05
CTDNEP1-208ENST00000573600 NUPR1O60356 82 aa21.6■■□□□ 1.05
CTDNEP1-208ENST00000573600 SAP30O75446 220 aa21.6■■□□□ 1.05
CTDNEP1-208ENST00000573600 LINC00310P59036 64 aa21.6■■□□□ 1.05
CTDNEP1-208ENST00000573600 PRR31Q5SQ13 230 aa21.6■■□□□ 1.05
CTDNEP1-208ENST00000573600 SMIM6P0DI80 62 aa21.6■■□□□ 1.05
CTDNEP1-208ENST00000573600 FAM159AQ6UWV7 190 aa21.6■■□□□ 1.05
CTDNEP1-208ENST00000573600 IGHV4-4A0A075B6R2 117 aa21.59■■□□□ 1.05
CTDNEP1-208ENST00000573600 H3BMM0 161 aa21.59■■□□□ 1.05
CTDNEP1-208ENST00000573600 ZNF324O75467 553 aaPredicted RBP21.59■■□□□ 1.05
CTDNEP1-208ENST00000573600 S100A4P26447 101 aaKnown RBP21.59■■□□□ 1.05
CTDNEP1-208ENST00000573600 OR2K2Q8NGT1 345 aa21.59■■□□□ 1.05
CTDNEP1-208ENST00000573600 TRAV12-3A0A0B4J271 114 aa21.58■■□□□ 1.05
CTDNEP1-208ENST00000573600 H3BVH4 76 aa21.58■■□□□ 1.05
CTDNEP1-208ENST00000573600 M0R2Z0 102 aa21.58■■□□□ 1.04
CTDNEP1-208ENST00000573600 SPINK13Q1W4C9 94 aa21.58■■□□□ 1.04
CTDNEP1-208ENST00000573600 PF4P02776 101 aa21.57■■□□□ 1.04
CTDNEP1-208ENST00000573600 IQCJQ1A5X6 159 aa21.57■■□□□ 1.04
CTDNEP1-208ENST00000573600 DMRTA1Q5VZB9 504 aa21.57■■□□□ 1.04
CTDNEP1-208ENST00000573600 OR10AG1Q8NH19 301 aa21.57■■□□□ 1.04
CTDNEP1-208ENST00000573600 MSRB1Q9NZV6 116 aa21.57■■□□□ 1.04
CTDNEP1-208ENST00000573600 CMC4P56277 68 aaPredicted RBP21.56■■□□□ 1.04
CTDNEP1-208ENST00000573600 TDRG1Q3Y452 100 aa21.56■■□□□ 1.04
CTDNEP1-208ENST00000573600 SPANXN1Q5VSR9 72 aa21.56■■□□□ 1.04
CTDNEP1-208ENST00000573600 IGLV1-51P01701 117 aa21.55■■□□□ 1.04
CTDNEP1-208ENST00000573600 SMIM15Q7Z3B0 74 aa21.55■■□□□ 1.04
CTDNEP1-208ENST00000573600 AMN1Q8IY45 258 aa21.55■■□□□ 1.04
CTDNEP1-208ENST00000573600 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.55■■□□□ 1.04
CTDNEP1-208ENST00000573600 RCHY1Q96PM5 261 aa21.55■■□□□ 1.04
CTDNEP1-208ENST00000573600 TRAV12-2A0A075B6T6 113 aa21.55■■□□□ 1.04
CTDNEP1-208ENST00000573600 C12orf57Q99622 126 aa21.55■■□□□ 1.04
CTDNEP1-208ENST00000573600 AGRNO00468 2067 aa21.55■■□□□ 1.04
CTDNEP1-208ENST00000573600 GNRH2O43555 120 aa21.54■■□□□ 1.04
CTDNEP1-208ENST00000573600 SCRT2Q9NQ03 307 aa21.54■■□□□ 1.04
CTDNEP1-208ENST00000573600 WNK1Q9H4A3 2382 aa21.54■■□□□ 1.04
CTDNEP1-208ENST00000573600 ODF3L2Q3SX64 289 aa21.53■■□□□ 1.04
CTDNEP1-208ENST00000573600 CLUHP3Q96NS8 147 aa21.53■■□□□ 1.04
CTDNEP1-208ENST00000573600 U3KQK5 164 aa21.53■■□□□ 1.04
CTDNEP1-208ENST00000573600 SORL1Q92673 2214 aa21.52■■□□□ 1.04
CTDNEP1-208ENST00000573600 ZNF124Q15973 351 aa21.52■■□□□ 1.04
CTDNEP1-208ENST00000573600 MRPL51Q4U2R6 128 aaKnown RBP21.52■■□□□ 1.04
CTDNEP1-208ENST00000573600 OR11H12B2RN74 326 aa21.52■■□□□ 1.03
CTDNEP1-208ENST00000573600 SAMD10Q9BYL1 202 aa21.52■■□□□ 1.03
CTDNEP1-208ENST00000573600 PHLDA3Q9Y5J5 127 aa21.52■■□□□ 1.03
CTDNEP1-208ENST00000573600 RNASE3P12724 160 aaKnown RBP21.51■■□□□ 1.03
CTDNEP1-208ENST00000573600 ORMDL3Q8N138 153 aa21.51■■□□□ 1.03
CTDNEP1-208ENST00000573600 LINC00482Q8N8I6 264 aa21.51■■□□□ 1.03
CTDNEP1-208ENST00000573600 TIMM8BQ9Y5J9 83 aaPredicted RBP21.51■■□□□ 1.03
CTDNEP1-208ENST00000573600 SETD2Q9BYW2 2564 aaPredicted RBP21.5■■□□□ 1.03
CTDNEP1-208ENST00000573600 C2CD3Q4AC94 2353 aa21.49■■□□□ 1.03
CTDNEP1-208ENST00000573600 IGHV1OR15-1A0A075B7D0 117 aa21.49■■□□□ 1.03
CTDNEP1-208ENST00000573600 CD7P09564 240 aa21.49■■□□□ 1.03
CTDNEP1-208ENST00000573600 RAB4AP20338 218 aa21.49■■□□□ 1.03
CTDNEP1-208ENST00000573600 D6R8Y8 96 aa21.49■■□□□ 1.03
CTDNEP1-208ENST00000573600 NIT1Q86X76 327 aa21.49■■□□□ 1.03
CTDNEP1-208ENST00000573600 RNF185Q96GF1 192 aa21.49■■□□□ 1.03
CTDNEP1-208ENST00000573600 RBMY1BA6NDE4 496 aaKnown RBP21.48■■□□□ 1.03
CTDNEP1-208ENST00000573600 RBMY1EA6NEQ0 496 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms