RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 GFI1BQ5VTD9 330 aa14.46□□□□□ -0.09
RPAIN-210ENST00000571613 ZNF256Q9Y2P7 627 aaPredicted RBP14.46□□□□□ -0.09
RPAIN-210ENST00000571613 FN1P02751 2386 aaKnown RBP14.46□□□□□ -0.09
RPAIN-210ENST00000571613 LOC102724200A0A096LPH7 203 aaPredicted RBP14.46□□□□□ -0.1
RPAIN-210ENST00000571613 SNAI2O43623 268 aa14.46□□□□□ -0.1
RPAIN-210ENST00000571613 FAM159AQ6UWV7 190 aa14.46□□□□□ -0.1
RPAIN-210ENST00000571613 TMEM18Q96B42 140 aa14.46□□□□□ -0.1
RPAIN-210ENST00000571613 ALKBH7Q9BT30 221 aaPredicted RBP14.46□□□□□ -0.1
RPAIN-210ENST00000571613 MAP6D1Q9H9H5 199 aa14.46□□□□□ -0.1
RPAIN-210ENST00000571613 NAGKQ9UJ70 344 aa14.46□□□□□ -0.1
RPAIN-210ENST00000571613 HIVEP1P15822 2718 aa14.45□□□□□ -0.1
RPAIN-210ENST00000571613 SAP30O75446 220 aa14.45□□□□□ -0.1
RPAIN-210ENST00000571613 PF4P02776 101 aa14.45□□□□□ -0.1
RPAIN-210ENST00000571613 ESDP10768 282 aa14.45□□□□□ -0.1
RPAIN-210ENST00000571613 NTF3P20783 257 aa14.45□□□□□ -0.1
RPAIN-210ENST00000571613 ASIPP42127 132 aa14.45□□□□□ -0.1
RPAIN-210ENST00000571613 KRTAP10-3P60369 221 aa14.45□□□□□ -0.1
RPAIN-210ENST00000571613 NSD1Q96L73 2696 aaPredicted RBP14.44□□□□□ -0.1
RPAIN-210ENST00000571613 S100A4P26447 101 aaKnown RBP14.44□□□□□ -0.1
RPAIN-210ENST00000571613 ANXA2RQ3ZCQ2 193 aa14.44□□□□□ -0.1
RPAIN-210ENST00000571613 SMIM15Q7Z3B0 74 aa14.44□□□□□ -0.1
RPAIN-210ENST00000571613 CLUHP3Q96NS8 147 aa14.44□□□□□ -0.1
RPAIN-210ENST00000571613 TMEM191AQ9H0A3 160 aa14.44□□□□□ -0.1
RPAIN-210ENST00000571613 CUBNO60494 3623 aa14.44□□□□□ -0.1
RPAIN-210ENST00000571613 IGHV4-4A0A075B6R2 117 aa14.43□□□□□ -0.1
RPAIN-210ENST00000571613 H3BMM0 161 aa14.43□□□□□ -0.1
RPAIN-210ENST00000571613 PDZD11Q5EBL8 140 aa14.43□□□□□ -0.1
RPAIN-210ENST00000571613 IGLV1-51P01701 117 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 TDRG1Q3Y452 100 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 DMRTA1Q5VZB9 504 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 FAM104BQ5XKR9 115 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 AMTNQ6UX39 209 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 HIST1H2BLQ99880 126 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 NF1P21359 2839 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 IFITM10A6NMD0 228 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 ZNF324O75467 553 aaPredicted RBP14.42□□□□□ -0.1
RPAIN-210ENST00000571613 IGKV3-20P01619 116 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 FABP4P15090 132 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 C18orf32Q8TCD1 76 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 FAM110AQ9BQ89 295 aa14.42□□□□□ -0.1
RPAIN-210ENST00000571613 KNCNA6PVL3 124 aa14.41□□□□□ -0.1
RPAIN-210ENST00000571613 SPANXN1Q5VSR9 72 aa14.41□□□□□ -0.1
RPAIN-210ENST00000571613 TMEM256Q8N2U0 113 aa14.41□□□□□ -0.1
RPAIN-210ENST00000571613 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.41□□□□□ -0.1
RPAIN-210ENST00000571613 PACRGQ96M98 296 aaPredicted RBP14.41□□□□□ -0.1
RPAIN-210ENST00000571613 FLNBO75369 2602 aaKnown RBP14.41□□□□□ -0.1
RPAIN-210ENST00000571613 TRAV12-3A0A0B4J271 114 aa14.4□□□□□ -0.1
RPAIN-210ENST00000571613 OR11H12B2RN74 326 aa14.4□□□□□ -0.1
RPAIN-210ENST00000571613 SERF1AO75920 110 aa14.4□□□□□ -0.1
RPAIN-210ENST00000571613 KIR3DS1Q14943 382 aa14.4□□□□□ -0.1
RPAIN-210ENST00000571613 SPINK13Q1W4C9 94 aa14.4□□□□□ -0.1
RPAIN-210ENST00000571613 Q6ZQT7 251 aa14.4□□□□□ -0.1
RPAIN-210ENST00000571613 TP53TG3Q9ULZ0 132 aa14.4□□□□□ -0.1
RPAIN-210ENST00000571613 H3BVH4 76 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 AMBPP02760 352 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 SMIM6P0DI80 62 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 MUC21Q5SSG8 566 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 M0R2Z0 102 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 PPBPP02775 128 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 SSTP61278 116 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 LINC00482Q8N8I6 264 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 OR10D4PQ8NGN7 298 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 SCRT2Q9NQ03 307 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 PHLDA3Q9Y5J5 127 aa14.39□□□□□ -0.11
RPAIN-210ENST00000571613 MUC21A0A0G2JKD1 596 aa14.38□□□□□ -0.11
RPAIN-210ENST00000571613 MUC21A0A140T8X8 626 aa14.38□□□□□ -0.11
RPAIN-210ENST00000571613 INSL3P51460 131 aa14.38□□□□□ -0.11
RPAIN-210ENST00000571613 LINC00518Q8N0U6 118 aa14.38□□□□□ -0.11
RPAIN-210ENST00000571613 OR10AG1Q8NH19 301 aa14.38□□□□□ -0.11
RPAIN-210ENST00000571613 C20orf144Q9BQM9 153 aa14.38□□□□□ -0.11
RPAIN-210ENST00000571613 C2CD3Q4AC94 2353 aa14.37□□□□□ -0.11
RPAIN-210ENST00000571613 IGHV1OR15-1A0A075B7D0 117 aa14.37□□□□□ -0.11
RPAIN-210ENST00000571613 ODF3L2Q3SX64 289 aa14.37□□□□□ -0.11
RPAIN-210ENST00000571613 ORMDL3Q8N138 153 aa14.37□□□□□ -0.11
RPAIN-210ENST00000571613 CITED1Q99966 193 aa14.37□□□□□ -0.11
RPAIN-210ENST00000571613 U3KQK5 164 aa14.37□□□□□ -0.11
RPAIN-210ENST00000571613 F8P00451 2351 aa14.36□□□□□ -0.11
RPAIN-210ENST00000571613 STHQ8IWL8 128 aa14.36□□□□□ -0.11
RPAIN-210ENST00000571613 AMN1Q8IY45 258 aa14.36□□□□□ -0.11
RPAIN-210ENST00000571613 TRAV12-2A0A075B6T6 113 aa14.36□□□□□ -0.11
RPAIN-210ENST00000571613 GNRH2O43555 120 aa14.36□□□□□ -0.11
RPAIN-210ENST00000571613 CD7P09564 240 aa14.36□□□□□ -0.11
RPAIN-210ENST00000571613 SAMD10Q9BYL1 202 aa14.36□□□□□ -0.11
RPAIN-210ENST00000571613 LAMTOR2Q9Y2Q5 125 aa14.36□□□□□ -0.11
RPAIN-210ENST00000571613 SETXQ7Z333 2677 aaKnown RBP14.35□□□□□ -0.11
RPAIN-210ENST00000571613 TRGV11A0A075B6L2 103 aa14.35□□□□□ -0.11
RPAIN-210ENST00000571613 RNASE3P12724 160 aaKnown RBP14.35□□□□□ -0.11
RPAIN-210ENST00000571613 LINC00310P59036 64 aa14.35□□□□□ -0.11
RPAIN-210ENST00000571613 NUTF2P61970 127 aaKnown RBP14.35□□□□□ -0.11
RPAIN-210ENST00000571613 BEAN1Q3B7T3 259 aa14.35□□□□□ -0.11
RPAIN-210ENST00000571613 MRPL51Q4U2R6 128 aaKnown RBP14.35□□□□□ -0.11
RPAIN-210ENST00000571613 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
RPAIN-210ENST00000571613 MSRB1Q9NZV6 116 aa14.35□□□□□ -0.11
RPAIN-210ENST00000571613 NUPR1O60356 82 aa14.34□□□□□ -0.11
RPAIN-210ENST00000571613 CKS2P33552 79 aa14.34□□□□□ -0.11
RPAIN-210ENST00000571613 WNK1Q9H4A3 2382 aa14.34□□□□□ -0.11
RPAIN-210ENST00000571613 SORL1Q92673 2214 aa14.34□□□□□ -0.11
RPAIN-210ENST00000571613 SETD2Q9BYW2 2564 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-210ENST00000571613 HSBP1O75506 76 aa14.33□□□□□ -0.11
RPAIN-210ENST00000571613 RAB4AP20338 218 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms