RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 M0R2Z0 102 aa8.12□□□□□ -1.11
PDXDC1-216ENST00000569715 HBBP68871 147 aa8.12□□□□□ -1.11
PDXDC1-216ENST00000569715 FOXI2Q6ZQN5 318 aa8.12□□□□□ -1.11
PDXDC1-216ENST00000569715 APRG1Q8IVJ8 170 aa8.12□□□□□ -1.11
PDXDC1-216ENST00000569715 NAGKQ9UJ70 344 aa8.12□□□□□ -1.11
PDXDC1-216ENST00000569715 TRRAPQ9Y4A5 3859 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 TRAV2A0A0B4J234 112 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 KLLNB2CW77 178 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 CTAG1AP78358 180 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 GFI1BQ5VTD9 330 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 WDR73Q6P4I2 378 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 ATP5L2Q7Z4Y8 100 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 SPAG8Q99932 426 aaPredicted RBP8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 TRAV12-2A0A075B6T6 113 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 A0A1B0GV90 55 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 PF4P02776 101 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 IGLC6P0CF74 106 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 LINC00482Q8N8I6 264 aa8.11□□□□□ -1.11
PDXDC1-216ENST00000569715 NOTCH3Q9UM47 2321 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 XKRY2A2RUG3 117 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 HLA-DQA1P01909 254 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 SPINK13Q1W4C9 94 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 ODF3L2Q3SX64 289 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 AMTNQ6UX39 209 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 FER1L6-AS1Q8NA97 138 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 TRBV7-9A0A0J9YWB2 115 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 RBMY1BA6NDE4 496 aaKnown RBP8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 RBMY1EA6NEQ0 496 aaKnown RBP8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 OR4C46A6NHA9 309 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 RBMY1DP0C7P1 496 aaKnown RBP8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 RPS20P60866 119 aaKnown RBP8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 Q6AWC8 147 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 RASL11AQ6T310 242 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 CITED1Q99966 193 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 TRAV21A0A0B4J279 112 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 MT-ND6P03923 174 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 CTRLP40313 264 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 FXYD7P58549 80 aa8.1□□□□□ -1.11
PDXDC1-216ENST00000569715 TRAV25A0A0B4J276 109 aa8.09□□□□□ -1.11
PDXDC1-216ENST00000569715 SCGB1D1O95968 90 aa8.09□□□□□ -1.11
PDXDC1-216ENST00000569715 IGLV1-51P01701 117 aa8.09□□□□□ -1.11
PDXDC1-216ENST00000569715 TRAV12-3A0A0B4J271 114 aa8.09□□□□□ -1.11
PDXDC1-216ENST00000569715 APCSP02743 223 aa8.09□□□□□ -1.11
PDXDC1-216ENST00000569715 HLA-DRB4P13762 266 aa8.09□□□□□ -1.11
PDXDC1-216ENST00000569715 KRTAP24-1Q3LI83 254 aa8.09□□□□□ -1.11
PDXDC1-216ENST00000569715 HLA-DRB4X5D2U9 266 aa8.09□□□□□ -1.11
PDXDC1-216ENST00000569715 H3BMM0 161 aa8.09□□□□□ -1.12
PDXDC1-216ENST00000569715 SPRY2O43597 315 aa8.09□□□□□ -1.12
PDXDC1-216ENST00000569715 ANXA2RQ3ZCQ2 193 aa8.09□□□□□ -1.12
PDXDC1-216ENST00000569715 COX19Q49B96 90 aa8.09□□□□□ -1.12
PDXDC1-216ENST00000569715 ODF3Q96PU9 254 aa8.09□□□□□ -1.12
PDXDC1-216ENST00000569715 DUSP14O95147 198 aaKnown RBP8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 C21orf62-AS1Q17RA5 79 aa8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 MSRB1Q9NZV6 116 aa8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 F2Z2F3 143 aa8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 UBE2CO00762 179 aa8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 LEPP41159 167 aa8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 C7orf71A4D174 169 aa8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 IFITM10A6NMD0 228 aa8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 RIGQ13278 110 aa8.08□□□□□ -1.12
PDXDC1-216ENST00000569715 STAB1Q9NY15 2570 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 H3BVH4 76 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 CDKN1BP46527 198 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 OR10AG1Q8NH19 301 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 GNRH2O43555 120 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 ZNF324O75467 553 aaPredicted RBP8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 SRIP30626 198 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 ZNF705AQ6ZN79 300 aaPredicted RBP8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 WFDC10AQ9H1F0 79 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 TP53TG3Q9ULZ0 132 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 TIMM8BQ9Y5J9 83 aaPredicted RBP8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 A8MTW9 85 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 RBMY1A1P0DJD3 496 aaKnown RBP8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 RBMY1CP0DJD4 496 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 HOXA5P20719 270 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 NTF3P20783 257 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 RBMY1FQ15415 496 aaKnown RBP8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 PRIMA1Q86XR5 153 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 BORCS7Q96B45 105 aa8.07□□□□□ -1.12
PDXDC1-216ENST00000569715 CD7P09564 240 aa8.06□□□□□ -1.12
PDXDC1-216ENST00000569715 TWIST1Q15672 202 aa8.06□□□□□ -1.12
PDXDC1-216ENST00000569715 TMEM256Q8N2U0 113 aa8.06□□□□□ -1.12
PDXDC1-216ENST00000569715 PACRGQ96M98 296 aaPredicted RBP8.06□□□□□ -1.12
PDXDC1-216ENST00000569715 CNFNQ9BYD5 112 aa8.06□□□□□ -1.12
PDXDC1-216ENST00000569715 CRXO43186 299 aaPredicted RBP8.06□□□□□ -1.12
PDXDC1-216ENST00000569715 LINC00310P59036 64 aa8.06□□□□□ -1.12
PDXDC1-216ENST00000569715 HIST3H2BBQ8N257 126 aa8.06□□□□□ -1.12
PDXDC1-216ENST00000569715 MUC4Q99102 2169 aa8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 NUPR1O60356 82 aa8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 GATD1Q8NB37 220 aa8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 OR11H12B2RN74 326 aa8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 TSPOP30536 169 aa8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 COA6Q5JTJ3 125 aaKnown RBP8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 SNAI2O43623 268 aa8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 IQCJQ1A5X6 159 aa8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 LURAP1LQ8IV03 231 aa8.05□□□□□ -1.12
PDXDC1-216ENST00000569715 LOC102724200A0A096LPH7 203 aaPredicted RBP8.04□□□□□ -1.12
PDXDC1-216ENST00000569715 TCAPO15273 167 aa8.04□□□□□ -1.12
PDXDC1-216ENST00000569715 RNASE3P12724 160 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms