RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 MORN4Q8NDC4 146 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 NT5CQ8TCD5 201 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 BORCS8Q96FH0 119 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 SND1-IT1Q9HBX3 110 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 NCOA6Q14686 2063 aaPredicted RBP3.37□□□□□ -1.87
UBR1-208ENST00000569066 MDFIC2A0A1B0GVS7 189 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 hADV29S1A0JD25 119 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 TCL1BO95988 128 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 FKBP1CQ5VVH2 108 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 AAED1Q7RTV5 226 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 LINC00596Q86U02 117 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 SLC25A45Q8N413 288 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 H1FXQ92522 213 aaKnown RBP3.37□□□□□ -1.87
UBR1-208ENST00000569066 RPUSD1Q9UJJ7 312 aaKnown RBP3.37□□□□□ -1.87
UBR1-208ENST00000569066 MYO9BQ13459 2157 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 MYO7AQ13402 2215 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 TRAV9-1A0A075B6T8 112 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 TRAV27A0A087WT01 109 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 TRAV13-1A0A0B4J241 112 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 DPM2O94777 84 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 IGKV1-39P01597 117 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 IGKV1D-39P04432 117 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 TMEM258P61165 79 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 ADIGQ0VDE8 80 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 FAM57AQ8TBR7 257 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 TMEM147Q9BVK8 224 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 FAM60AQ9NP50 221 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 NHP2Q9NX24 153 aaKnown RBP3.36□□□□□ -1.87
UBR1-208ENST00000569066 OBSL1O75147 1896 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 NRXN2Q9P2S2 1712 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 EFNA4P52798 201 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 PLGLB1Q02325 96 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 RRN3P1Q2M238 152 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 SHANK2-AS3Q9BTD1 123 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 AGPAT4-IT1Q9H0P7 198 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 IL36BQ9NZH7 164 aa3.36□□□□□ -1.87
UBR1-208ENST00000569066 CASP8AP2Q9UKL3 1982 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 ANAPC1Q9H1A4 1944 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 TMSB15BA0A087X1C1 80 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 TRAV8-2A0A0B4J237 113 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 A0A1W2PNU3 283 aaPredicted RBP3.35□□□□□ -1.87
UBR1-208ENST00000569066 TRACP01848 142 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 COX7CP15954 63 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 LINC01545Q5VT33 79 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 Q6ZS49 121 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 SBSPONQ8IVN8 264 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 NUP35Q8NFH5 326 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 METTL26Q96S19 204 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 CHCHD7Q9BUK0 85 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 C11orf1Q9H5F2 150 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 NRXN3Q9Y4C0 1643 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 TRBV20OR9-2A0A075B6H5 130 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 A0A0D9SEW6 157 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 TRBV7-7A0A0K0K1E9 115 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 C3orf85A0A1B0GTC6 90 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 CPSF4LA6NMK7 179 aaKnown RBP3.35□□□□□ -1.87
UBR1-208ENST00000569066 CCL22O00626 93 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 PRB2P02812 416 aaPredicted RBP3.35□□□□□ -1.87
UBR1-208ENST00000569066 HLA-DRB4P13762 266 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 ATP5G3P48201 142 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 ZNF117Q03924 483 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 PRDX1Q06830 199 aaKnown RBP3.35□□□□□ -1.87
UBR1-208ENST00000569066 TRAPPC6BQ86SZ2 158 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 C1orf158Q8N1D5 194 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 SLC25A29Q8N8R3 303 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 OR5C1Q8NGR4 320 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 HEATR1Q9H583 2144 aaKnown RBP3.35□□□□□ -1.87
UBR1-208ENST00000569066 HLA-DRB4X5D2U9 266 aa3.35□□□□□ -1.87
UBR1-208ENST00000569066 PTPRBP23467 1997 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 TRAV26-2A0A0B4J265 109 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 IGKV1-6A0A0C4DH72 117 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 TCRBV4S1A1TA0A5B7 111 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 SPINK4O60575 86 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 TCRAP04437 139 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 MGST1P10620 155 aaKnown RBP3.34□□□□□ -1.87
UBR1-208ENST00000569066 CLEC19AQ6UXS0 136 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 DGAT2L6Q6ZPD8 337 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 PDPNQ86YL7 162 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 SPACA5Q96QH8 159 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 DPH3P1Q9H4G8 78 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 LINC00527Q9UJ94 153 aa3.34□□□□□ -1.87
UBR1-208ENST00000569066 ADAMTS7Q9UKP4 1686 aa3.34□□□□□ -1.88
UBR1-208ENST00000569066 TRAV2A0A0B4J234 112 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 IGHV1-24A0A0C4DH33 117 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 MYBPHLA2RUH7 354 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 C5orf49A4QMS7 147 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 LEPROTL1O95214 131 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 GLI3P10071 1580 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 PSMB8P28062 276 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 PLXNA3P51805 1871 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 DYNLT3P51808 116 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 SMIM11AP58511 58 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 C12orf74Q32Q52 190 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 FP248Q71RG6 208 aaPredicted RBP3.33□□□□□ -1.88
UBR1-208ENST00000569066 TMEM105Q8N8V8 129 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 SCN3AQ9NY46 2000 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 POLEQ07864 2286 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 LRCOL1A6NCL2 159 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms