RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 DGAT2L7PQ6IED9 249 aa8.52□□□□□ -1.05
PALB2-206ENST00000568219 NTN5Q8WTR8 489 aaPredicted RBP8.52□□□□□ -1.05
PALB2-206ENST00000568219 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
PALB2-206ENST00000568219 HIGD1BQ9P298 99 aa8.52□□□□□ -1.05
PALB2-206ENST00000568219 OR11H6Q8NGC7 330 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 ZNF688P0C7X2 276 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 CD59P13987 128 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 C5orf64Q2M2E5 130 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 FAM159AQ6UWV7 190 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 DKK4Q9UBT3 224 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 SLC25A20O43772 301 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 DEFB1P60022 68 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 TCF15Q12870 199 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 PTPRQQ9UMZ3 2332 aa8.51□□□□□ -1.05
PALB2-206ENST00000568219 CRYGCP07315 174 aa8.5□□□□□ -1.05
PALB2-206ENST00000568219 SMIM2Q9BVW6 85 aa8.5□□□□□ -1.05
PALB2-206ENST00000568219 AGPAT4-IT1Q9H0P7 198 aa8.5□□□□□ -1.05
PALB2-206ENST00000568219 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
PALB2-206ENST00000568219 BOD1L1Q8NFC6 3051 aa8.5□□□□□ -1.05
PALB2-206ENST00000568219 Q6ZUT4 128 aa8.5□□□□□ -1.05
PALB2-206ENST00000568219 PF4V1P10720 104 aa8.5□□□□□ -1.05
PALB2-206ENST00000568219 ZNF493Q6ZR52 646 aa8.5□□□□□ -1.05
PALB2-206ENST00000568219 CD7P09564 240 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 C10orf126Q8N4M7 172 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 TM2D2Q9BX73 214 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 TEX22C9J3V5 150 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 KLRB1Q12918 225 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 GAGE12JA6NER3 117 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 GAGE7O76087 117 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 GAGE12FP0CL80 117 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 GAGE12GP0CL81 117 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 GAGE12IP0CL82 117 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 GAGE4Q13068 117 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 TAL2Q16559 108 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 SPXQ9BT56 116 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 VCX2Q9H322 139 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 HHLA3Q9XRX5 114 aa8.49□□□□□ -1.05
PALB2-206ENST00000568219 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.48□□□□□ -1.05
PALB2-206ENST00000568219 MBD3L4A6NDZ8 208 aaPredicted RBP8.48□□□□□ -1.05
PALB2-206ENST00000568219 MBD3L3A6NE82 208 aaPredicted RBP8.48□□□□□ -1.05
PALB2-206ENST00000568219 MBD3L5A6NJ08 208 aaPredicted RBP8.48□□□□□ -1.05
PALB2-206ENST00000568219 XGP55808 180 aa8.48□□□□□ -1.05
PALB2-206ENST00000568219 TRPT1Q86TN4 253 aaKnown RBP8.48□□□□□ -1.05
PALB2-206ENST00000568219 ANKRD29Q8N6D5 301 aa8.48□□□□□ -1.05
PALB2-206ENST00000568219 MBD3L2Q8NHZ7 208 aaPredicted RBP8.48□□□□□ -1.05
PALB2-206ENST00000568219 PRO1854Q9UHT4 67 aa8.48□□□□□ -1.05
PALB2-206ENST00000568219 G3V318 75 aa8.48□□□□□ -1.05
PALB2-206ENST00000568219 LY6EQ16553 131 aa8.48□□□□□ -1.05
PALB2-206ENST00000568219 TEN1Q86WV5 123 aa8.48□□□□□ -1.05
PALB2-206ENST00000568219 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
PALB2-206ENST00000568219 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
PALB2-206ENST00000568219 WI2-2373I1.2A0A1W2PRP0 233 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 LGALS1P09382 135 aaKnown RBP8.47□□□□□ -1.05
PALB2-206ENST00000568219 TMEM219Q86XT9 240 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 PLEKHB2Q96CS7 222 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 SLC50A1Q9BRV3 221 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 FAM215AQ9Y5M1 114 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 MGAQ8IWI9 3026 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 PTPRBP23467 1997 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 IGHV3-73A0A0B4J1V6 119 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 SEM1Q6ZVN7 128 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 DPH3P1Q9H4G8 78 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 TRAV8-3A0A0A6YYJ7 113 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 CFAP47Q6ZTR5 3102 aa8.47□□□□□ -1.05
PALB2-206ENST00000568219 TRAV21A0A0B4J279 112 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 F6UB75 175 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 DUSP14O95147 198 aaKnown RBP8.46□□□□□ -1.05
PALB2-206ENST00000568219 IFITM1P13164 125 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 LINC00311Q8N616 119 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 LINC00477Q96M19 166 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 ADAMTS20P59510 1910 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 GNRH2O43555 120 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 GATA3P23771 443 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 C15orf53Q8NAA6 179 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 EEF1AKMT3Q96AZ1 226 aa8.46□□□□□ -1.05
PALB2-206ENST00000568219 B9A039 149 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 CEACAM4O75871 244 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 FSTL3O95633 263 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 TCL1BO95988 128 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 A0A0G2JNJ9 132 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 E7EQL1 145 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 Q6ZQT7 251 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 PIP4P2Q8N4L2 257 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 Q9UFV3 132 aa8.46□□□□□ -1.06
PALB2-206ENST00000568219 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
PALB2-206ENST00000568219 HERV-K104P63124 156 aa8.45□□□□□ -1.06
PALB2-206ENST00000568219 ZNF672Q499Z4 452 aaPredicted RBP8.45□□□□□ -1.06
PALB2-206ENST00000568219 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
PALB2-206ENST00000568219 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
PALB2-206ENST00000568219 PAPPA-AS1Q5QFB9 102 aa8.45□□□□□ -1.06
PALB2-206ENST00000568219 RNF185Q96GF1 192 aa8.45□□□□□ -1.06
PALB2-206ENST00000568219 CACNA1AO00555 2505 aa8.45□□□□□ -1.06
PALB2-206ENST00000568219 A4D1N5 150 aa8.45□□□□□ -1.06
PALB2-206ENST00000568219 INS-IGF2F8WCM5 200 aa8.45□□□□□ -1.06
PALB2-206ENST00000568219 FAM57AQ8TBR7 257 aa8.45□□□□□ -1.06
PALB2-206ENST00000568219 FAM208BQ5VWN6 2430 aa8.44□□□□□ -1.06
PALB2-206ENST00000568219 RNASE13Q5GAN3 156 aaKnown RBP8.44□□□□□ -1.06
PALB2-206ENST00000568219 TCTEX1D4Q5JR98 221 aa8.44□□□□□ -1.06
PALB2-206ENST00000568219 SPATA25Q9BR10 227 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms