RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CD28P10747 220 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 LEPP41159 167 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 PROK1P58294 105 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 SLAQ13239 276 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 GDF5OSQ5U4N7 250 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 DMRTA1Q5VZB9 504 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 ADAMTSL5Q6ZMM2 481 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 ZNF493Q6ZR52 646 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 WFDC3Q8IUB2 231 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 DLX4Q92988 240 aaPredicted RBP10.93□□□□□ -0.66
COMMD4-221ENST00000567935 RAX2Q96IS3 184 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 DNAH3Q8TD57 4116 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 GPX1P07203 203 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 ZNF688P0C7X2 276 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 TSPOP30536 169 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 PSMG4Q5JS54 123 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 FOXI2Q6ZQN5 318 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 BAGE3Q86Y29 109 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 LINC00518Q8N0U6 118 aa10.92□□□□□ -0.66
COMMD4-221ENST00000567935 PACRGQ96M98 296 aaPredicted RBP10.92□□□□□ -0.66
COMMD4-221ENST00000567935 CITED2Q99967 270 aaPredicted RBP10.92□□□□□ -0.66
COMMD4-221ENST00000567935 DYNC2H1Q8NCM8 4307 aaKnown RBP10.92□□□□□ -0.66
COMMD4-221ENST00000567935 TMSB15BA0A087X1C1 80 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 A0A0J9YX75 114 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 IFITM10A6NMD0 228 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 G3V4G9 280 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 MED14OSP0DP75 135 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 SRIP30626 198 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 KRTAP10-3P60369 221 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 HIST1H2BLQ99880 126 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 SPAG8Q99932 426 aaPredicted RBP10.91□□□□□ -0.66
COMMD4-221ENST00000567935 TPPP3Q9BW30 176 aa10.91□□□□□ -0.66
COMMD4-221ENST00000567935 LOC102724200A0A096LPH7 203 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-221ENST00000567935 IGKV3D-20A0A0C4DH25 116 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 GRIFINA4D1Z8 144 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 OR4C46A6NHA9 309 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 KLLNB2CW77 178 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 OR5AL1P0C617 328 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 ZNF705DP0CH99 300 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-221ENST00000567935 ZNF705BP0CI00 300 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-221ENST00000567935 TFPI2P48307 235 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 CACNG7P62955 275 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 DEFB114Q30KQ6 69 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 MRAPQ8TCY5 172 aa10.9□□□□□ -0.66
COMMD4-221ENST00000567935 ALKBH7Q9BT30 221 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-221ENST00000567935 SACSQ9NZJ4 4579 aa10.9□□□□□ -0.67
COMMD4-221ENST00000567935 DNAH9Q9NYC9 4486 aa10.9□□□□□ -0.67
COMMD4-221ENST00000567935 F6UB75 175 aa10.89□□□□□ -0.67
COMMD4-221ENST00000567935 FABP4P15090 132 aa10.89□□□□□ -0.67
COMMD4-221ENST00000567935 KIAA1644Q3SXP7 199 aa10.89□□□□□ -0.67
COMMD4-221ENST00000567935 DNLZQ5SXM8 178 aa10.89□□□□□ -0.67
COMMD4-221ENST00000567935 NDUFA11Q86Y39 141 aa10.89□□□□□ -0.67
COMMD4-221ENST00000567935 SSBP4Q9BWG4 385 aaPredicted RBP10.89□□□□□ -0.67
COMMD4-221ENST00000567935 A8MTW9 85 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 SNAI2O43623 268 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 AMBPP02760 352 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 PDZD11Q5EBL8 140 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 KPRPQ5T749 579 aaPredicted RBP10.88□□□□□ -0.67
COMMD4-221ENST00000567935 TMEM61Q8N0U2 210 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 C18orf32Q8TCD1 76 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 KCNS1Q96KK3 526 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 DUX3Q96PT4 197 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
COMMD4-221ENST00000567935 TENM3Q9P273 2699 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 IGHV4-4A0A075B6R2 117 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 A0A1W2PRX2 142 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 SERF1AO75920 110 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 CMC4P56277 68 aaPredicted RBP10.87□□□□□ -0.67
COMMD4-221ENST00000567935 PRR9Q5T870 116 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 ZNF575Q86XF7 245 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 OR10D4PQ8NGN7 298 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 OR2K2Q8NGT1 345 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 TMEM191AQ9H0A3 160 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 TP53TG3Q9ULZ0 132 aa10.87□□□□□ -0.67
COMMD4-221ENST00000567935 C7orf71A4D174 169 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 RNASE4P34096 147 aaKnown RBP10.86□□□□□ -0.67
COMMD4-221ENST00000567935 ASIPP42127 132 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 TWIST1Q15672 202 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 FAM104BQ5XKR9 115 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 SMIM15Q7Z3B0 74 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 TMEM256Q8N2U0 113 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 CLUHP3Q96NS8 147 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 C12orf57Q99622 126 aa10.86□□□□□ -0.67
COMMD4-221ENST00000567935 PPBPP02775 128 aa10.85□□□□□ -0.67
COMMD4-221ENST00000567935 HLA-DRB4P13762 266 aa10.85□□□□□ -0.67
COMMD4-221ENST00000567935 NTF3P20783 257 aa10.85□□□□□ -0.67
COMMD4-221ENST00000567935 CDKN1BP46527 198 aa10.85□□□□□ -0.67
COMMD4-221ENST00000567935 DEFB1P60022 68 aa10.85□□□□□ -0.67
COMMD4-221ENST00000567935 SAMD5Q5TGI4 173 aa10.85□□□□□ -0.67
COMMD4-221ENST00000567935 SELENOKQ9Y6D0 94 aa10.85□□□□□ -0.67
COMMD4-221ENST00000567935 HLA-DRB4X5D2U9 266 aa10.85□□□□□ -0.67
COMMD4-221ENST00000567935 S100A4P26447 101 aaKnown RBP10.84□□□□□ -0.67
COMMD4-221ENST00000567935 DEFB131AP59861 70 aa10.84□□□□□ -0.67
COMMD4-221ENST00000567935 TDRG1Q3Y452 100 aa10.84□□□□□ -0.67
COMMD4-221ENST00000567935 CD300EQ496F6 205 aaPredicted RBP10.84□□□□□ -0.67
COMMD4-221ENST00000567935 FAM159AQ6UWV7 190 aa10.84□□□□□ -0.67
COMMD4-221ENST00000567935 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms