RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 B9D2Q9BPU9 175 aa8.12□□□□□ -1.11
SF3B3-205ENST00000564899 TUBA4BQ9H853 241 aa8.12□□□□□ -1.11
SF3B3-205ENST00000564899 NAGKQ9UJ70 344 aa8.12□□□□□ -1.11
SF3B3-205ENST00000564899 V9GYV3 84 aa8.12□□□□□ -1.11
SF3B3-205ENST00000564899 PCLOQ9Y6V0 5065 aa8.11□□□□□ -1.11
SF3B3-205ENST00000564899 LOC102724200A0A096LPH7 203 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-205ENST00000564899 TMEM189A5PLL7 270 aa8.11□□□□□ -1.11
SF3B3-205ENST00000564899 CRXO43186 299 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-205ENST00000564899 SCO1O75880 301 aa8.11□□□□□ -1.11
SF3B3-205ENST00000564899 CA1P00915 261 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-205ENST00000564899 ORM1P02763 201 aa8.11□□□□□ -1.11
SF3B3-205ENST00000564899 RPL19P84098 196 aaKnown RBP8.11□□□□□ -1.11
SF3B3-205ENST00000564899 XCL2Q9UBD3 114 aa8.11□□□□□ -1.11
SF3B3-205ENST00000564899 AGRNO00468 2067 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 TMSB15BA0A087X1C1 80 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 IGHV4-30-4P0DP06 118 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
SF3B3-205ENST00000564899 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 CT83Q5H943 113 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 MUC21Q5SSG8 566 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 C1QTNF4Q9BXJ3 329 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 TMEM242Q9NWH2 141 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 C11orf21Q9P2W6 132 aa8.1□□□□□ -1.11
SF3B3-205ENST00000564899 XKRY2A2RUG3 117 aa8.09□□□□□ -1.11
SF3B3-205ENST00000564899 A8MWL6 223 aa8.09□□□□□ -1.11
SF3B3-205ENST00000564899 ZNF324O75467 553 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-205ENST00000564899 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-205ENST00000564899 RBMY1A1P0DJD3 496 aaKnown RBP8.09□□□□□ -1.11
SF3B3-205ENST00000564899 RBMY1CP0DJD4 496 aa8.09□□□□□ -1.11
SF3B3-205ENST00000564899 RPS20P60866 119 aaKnown RBP8.09□□□□□ -1.11
SF3B3-205ENST00000564899 RBMY1FQ15415 496 aaKnown RBP8.09□□□□□ -1.11
SF3B3-205ENST00000564899 TMEM88Q6PEY1 159 aa8.09□□□□□ -1.11
SF3B3-205ENST00000564899 C20orf144Q9BQM9 153 aa8.09□□□□□ -1.11
SF3B3-205ENST00000564899 CSTL1Q9H114 145 aa8.09□□□□□ -1.11
SF3B3-205ENST00000564899 IL36BQ9NZH7 164 aa8.09□□□□□ -1.11
SF3B3-205ENST00000564899 HERC2O95714 4834 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 IGHV1OR15-1A0A075B7D0 117 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 IGKV3D-20A0A0C4DH25 116 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 GZMBP10144 247 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 APOC4P55056 127 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 TCL1AP56279 114 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 ANXA2RQ3ZCQ2 193 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 FAM159AQ6UWV7 190 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 CBLN2Q8IUK8 224 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 TSKUQ8WUA8 353 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 TMEM208Q9BTX3 173 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 SMCO4Q9NRQ5 59 aa8.08□□□□□ -1.12
SF3B3-205ENST00000564899 KIR2DL5BA0A0G2JN68 375 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 KIR2DL5BA0A0G2JPC4 375 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 GRIFINA4D1Z8 144 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 CXorf65A6NEN9 183 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 S100PP25815 95 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 KCNIP4Q6PIL6 250 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 KIR2DL5AQ8N109 375 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 KIR2DL5BQ8NHK3 375 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 KCNS1Q96KK3 526 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 IMMP2LQ96T52 175 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 LINC01587Q99440 93 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 NEU1Q99519 415 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 GOLT1BQ9Y3E0 138 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 URGCP-MRPS24S4R325 110 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 FRAS1Q86XX4 4008 aa8.07□□□□□ -1.12
SF3B3-205ENST00000564899 IGHV3OR16-12A0A075B7B8 117 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 SMIM27A0A1W2PRY6 76 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 FAM231BA6NCW3 169 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 A8MZ25 164 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 TYMSP04818 313 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 CXCL1P09341 107 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 ASIPP42127 132 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 TDRG1Q3Y452 100 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 C1orf158Q8N1D5 194 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 TMEM256Q8N2U0 113 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 GTSF1Q8WW33 167 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 PYGO2Q9BRQ0 406 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 GFRA4Q9GZZ7 299 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 NAT8BQ9UHF3 227 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 U3KQK5 164 aa8.06□□□□□ -1.12
SF3B3-205ENST00000564899 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 A0A1W2PPQ1 181 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 CBY3A6NI87 242 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 HIGD1CA8MV81 97 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 GNRH2O43555 120 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 HTN1P15515 57 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 S100A4P26447 101 aaKnown RBP8.05□□□□□ -1.12
SF3B3-205ENST00000564899 FAM3BP58499 235 aaPredicted RBP8.05□□□□□ -1.12
SF3B3-205ENST00000564899 CASC10Q5T4H9 136 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 FER1L6-AS1Q8NA97 138 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 CSNK1G2-AS1Q8NCQ2 148 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 PGLYRP4Q96LB8 373 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 LINC00467Q9BRT7 94 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 TPPP3Q9BW30 176 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 TP53TG3Q9ULZ0 132 aa8.05□□□□□ -1.12
SF3B3-205ENST00000564899 UBE2CO00762 179 aa8.04□□□□□ -1.12
SF3B3-205ENST00000564899 FRMD6-AS1P0C7T7 363 aa8.04□□□□□ -1.12
SF3B3-205ENST00000564899 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
SF3B3-205ENST00000564899 ELOBQ15370 118 aa8.04□□□□□ -1.12
SF3B3-205ENST00000564899 ZNF575Q86XF7 245 aa8.04□□□□□ -1.12
SF3B3-205ENST00000564899 NUP35Q8NFH5 326 aa8.04□□□□□ -1.12
SF3B3-205ENST00000564899 TIMM8BQ9Y5J9 83 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-205ENST00000564899 RYR1P21817 5038 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms