RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 TRAV34A0A0B4J273 112 aa7□□□□□ -1.29
CDH1-206ENST00000564676 A0A1B0GV50 99 aa7□□□□□ -1.29
CDH1-206ENST00000564676 FBLL1A6NHQ2 334 aaKnown RBP7□□□□□ -1.29
CDH1-206ENST00000564676 PEX7O00628 323 aa7□□□□□ -1.29
CDH1-206ENST00000564676 ZFP69Q49AA0 526 aa7□□□□□ -1.29
CDH1-206ENST00000564676 EIF5AL1Q6IS14 154 aaKnown RBP7□□□□□ -1.29
CDH1-206ENST00000564676 DPPA3Q6W0C5 159 aa7□□□□□ -1.29
CDH1-206ENST00000564676 UBE2DNLQ8IWF7 75 aa7□□□□□ -1.29
CDH1-206ENST00000564676 TMEM75Q8N9X5 138 aa7□□□□□ -1.29
CDH1-206ENST00000564676 C15orf53Q8NAA6 179 aa7□□□□□ -1.29
CDH1-206ENST00000564676 MBD3L1Q8WWY6 194 aa7□□□□□ -1.29
CDH1-206ENST00000564676 HIST1H2BAQ96A08 127 aa7□□□□□ -1.29
CDH1-206ENST00000564676 C8orf49Q96NF6 230 aa7□□□□□ -1.29
CDH1-206ENST00000564676 NACAE9PAV3 2078 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 SPINK4O60575 86 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 NUDT3O95989 172 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 GCGP01275 180 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 IGLV2-11P01706 119 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 H2AFB1P0C5Y9 115 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 SMUG1Q53HV7 270 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 SAPCD1Q5SSQ6 148 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 POM121L12Q8N7R1 296 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 LINC00479Q96M42 142 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 SDF2L1Q9HCN8 221 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 MRPL16Q9NX20 251 aaKnown RBP6.99□□□□□ -1.29
CDH1-206ENST00000564676 MDFICQ9P1T7 246 aa6.99□□□□□ -1.29
CDH1-206ENST00000564676 MUC4Q99102 2169 aa6.98□□□□□ -1.29
CDH1-206ENST00000564676 GNRH2O43555 120 aa6.98□□□□□ -1.29
CDH1-206ENST00000564676 PAGE4O60829 102 aa6.98□□□□□ -1.29
CDH1-206ENST00000564676 RAB5CP51148 216 aa6.98□□□□□ -1.29
CDH1-206ENST00000564676 LGALS9BQ3B8N2 356 aa6.98□□□□□ -1.29
CDH1-206ENST00000564676 SLC51BQ86UW2 128 aa6.98□□□□□ -1.29
CDH1-206ENST00000564676 KCNS1Q96KK3 526 aa6.98□□□□□ -1.29
CDH1-206ENST00000564676 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 TRAV26-1A0A087WT03 109 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 A0A0J9YY99 117 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 IGHV3-53P01767 116 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 TYMSP04818 313 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 PFN1P07737 140 aaKnown RBP6.97□□□□□ -1.29
CDH1-206ENST00000564676 HOXA5P20719 270 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 AKR1C3P42330 323 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 ZNF80P51504 273 aaPredicted RBP6.97□□□□□ -1.29
CDH1-206ENST00000564676 TDRG1Q3Y452 100 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 TCEAL7Q9BRU2 100 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 SPXQ9BT56 116 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 ARL2-SNX15V9GYD0 113 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
CDH1-206ENST00000564676 IGHV3-16A0A0C4DH30 117 aa6.96□□□□□ -1.3
CDH1-206ENST00000564676 TEX46H3BTG2 121 aa6.96□□□□□ -1.3
CDH1-206ENST00000564676 UBE2G1P62253 170 aa6.96□□□□□ -1.3
CDH1-206ENST00000564676 Q86TA4 180 aa6.96□□□□□ -1.3
CDH1-206ENST00000564676 C18orf15Q96N68 181 aa6.96□□□□□ -1.3
CDH1-206ENST00000564676 A0A1B0GVG6 124 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 FABP5P3A8MUU1 101 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 M0R2P5 195 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 SULT1A2P50226 295 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 RNF212Q495C1 297 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 C9orf62Q8N4C0 152 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 RASL10AQ92737 203 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 FMC1Q96HJ9 113 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 GNG13Q9P2W3 67 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 ZFP30Q9Y2G7 519 aa6.95□□□□□ -1.3
CDH1-206ENST00000564676 TRGV4A0A0C4DH28 118 aa6.94□□□□□ -1.3
CDH1-206ENST00000564676 S100A9P06702 114 aaKnown RBP6.94□□□□□ -1.3
CDH1-206ENST00000564676 CCL18P55774 89 aa6.94□□□□□ -1.3
CDH1-206ENST00000564676 CCL20P78556 96 aa6.94□□□□□ -1.3
CDH1-206ENST00000564676 SLAQ13239 276 aa6.94□□□□□ -1.3
CDH1-206ENST00000564676 MANBALQ9NQG1 85 aa6.94□□□□□ -1.3
CDH1-206ENST00000564676 C11orf21Q9P2W6 132 aa6.94□□□□□ -1.3
CDH1-206ENST00000564676 IGLV2-18A0A075B6J9 118 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 TRAV1-1A0A0B4J248 108 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 TRBV6-1A0A0K0K1D8 114 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 C9JCJ5 164 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 H3BNG1 76 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 M0R2N4 97 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 PAX4O43316 350 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 ORM1P02763 201 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 SFTA3P0C7M3 94 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 S100A4P26447 101 aaKnown RBP6.93□□□□□ -1.3
CDH1-206ENST00000564676 OR4C5Q8NGB2 326 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 ZC2HC1AQ96GY0 325 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 PRO0255Q9UI72 69 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 HHLA3Q9XRX5 114 aa6.93□□□□□ -1.3
CDH1-206ENST00000564676 DNAH10Q8IVF4 4471 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 TRAV4A0A0B4J268 109 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 IGKV3D-20A0A0C4DH25 116 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 B4DEV8 164 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 LTAP01374 205 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 NKX2-5P52952 324 aaPredicted RBP6.92□□□□□ -1.3
CDH1-206ENST00000564676 FAM3BP58499 235 aaPredicted RBP6.92□□□□□ -1.3
CDH1-206ENST00000564676 FHL2Q14192 279 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 FAM162BQ5T6X4 162 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 VSIG2Q96IQ7 327 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 ZNF479Q96JC4 524 aa6.92□□□□□ -1.3
CDH1-206ENST00000564676 M0R036 132 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 SH2D1AO60880 128 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 IFNA1P01562 189 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms