RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TRAV12-2A0A075B6T6 113 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 IGKV3D-20A0A0C4DH25 116 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 A0A1B0GUT8 65 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 A0A1B0GW15 77 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 TYMSP04818 313 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 S100A8P05109 93 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 S100A4P26447 101 aaKnown RBP7.59□□□□□ -1.19
USP3-219ENST00000561326 FXYD7P58549 80 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 ANXA2RQ3ZCQ2 193 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 WDR73Q6P4I2 378 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 ATP5L2Q7Z4Y8 100 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 TMEM256Q8N2U0 113 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 FER1L6-AS1Q8NA97 138 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 GTSF1Q8WW33 167 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 TPPP3Q9BW30 176 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 SRD5A3Q9H8P0 318 aa7.59□□□□□ -1.19
USP3-219ENST00000561326 GRIFINA4D1Z8 144 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 SPINK4O60575 86 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 INSP01308 110 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 ASIPP42127 132 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 KIR3DS1Q14943 382 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 TDRG1Q3Y452 100 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 DNLZQ5SXM8 178 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 LYZL1Q6UWQ5 148 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 DEFB125Q8N687 156 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 C11orf21Q9P2W6 132 aa7.58□□□□□ -1.2
USP3-219ENST00000561326 PKD1L1Q8TDX9 2849 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 IGHV1OR15-1A0A075B7D0 117 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 RBMY1BA6NDE4 496 aaKnown RBP7.57□□□□□ -1.2
USP3-219ENST00000561326 RBMY1EA6NEQ0 496 aaKnown RBP7.57□□□□□ -1.2
USP3-219ENST00000561326 C1orf196B1AJZ1 125 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 MT-ND6P03923 174 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 RBMY1DP0C7P1 496 aaKnown RBP7.57□□□□□ -1.2
USP3-219ENST00000561326 IGLC6P0CF74 106 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
USP3-219ENST00000561326 RIPPLY3P57055 190 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 RAB4BP61018 213 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 OXLD1Q5BKU9 147 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 MRPL54Q6P161 138 aaKnown RBP7.57□□□□□ -1.2
USP3-219ENST00000561326 LINC01587Q99440 93 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 TMEM208Q9BTX3 173 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 GNB1LQ9BYB4 327 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 XCL2Q9UBD3 114 aa7.57□□□□□ -1.2
USP3-219ENST00000561326 TRGV11A0A075B6L2 103 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 CRXO43186 299 aaPredicted RBP7.56□□□□□ -1.2
USP3-219ENST00000561326 GNRH2O43555 120 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 OR5AL1P0C617 328 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 CTRLP40313 264 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 CACNG7P62955 275 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 HBBP68871 147 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 Q6ZQT7 251 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 MDFIQ99750 246 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 CSTL1Q9H114 145 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 GOLT1BQ9Y3E0 138 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 TRAPPC1Q9Y5R8 145 aa7.56□□□□□ -1.2
USP3-219ENST00000561326 MUC4Q99102 2169 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 LOC102724200A0A096LPH7 203 aaPredicted RBP7.55□□□□□ -1.2
USP3-219ENST00000561326 CBY3A6NI87 242 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 HLA-DQA1P01909 254 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 ARMS2P0C7Q2 107 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 CAMPP49913 170 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 RAB5BP61020 215 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 EGFEM1PQ0D2K5 195 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 SPANXN1Q5VSR9 72 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 SMIM15Q7Z3B0 74 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 Q8N1Y9 231 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 FRZBQ92765 325 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 LINC00467Q9BRT7 94 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 SSBP4Q9BWG4 385 aaPredicted RBP7.55□□□□□ -1.2
USP3-219ENST00000561326 WFDC10AQ9H1F0 79 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 PHLDA3Q9Y5J5 127 aa7.55□□□□□ -1.2
USP3-219ENST00000561326 KIR2DL5BA0A0G2JN68 375 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 KIR2DL5BA0A0G2JPC4 375 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 SNURFLB1AK76 121 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 H3BVH4 76 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 SNAI2O43623 268 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 TRGC2P03986 189 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 HTN1P15515 57 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 NTF3P20783 257 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 APOC4P55056 127 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 SSTP61278 116 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 FABP9Q0Z7S8 132 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 TWIST1Q15672 202 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 ZNF575Q86XF7 245 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 KIR2DL5AQ8N109 375 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 KIR2DL5BQ8NHK3 375 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 CNFNQ9BYD5 112 aa7.54□□□□□ -1.2
USP3-219ENST00000561326 TIMM8BQ9Y5J9 83 aaPredicted RBP7.54□□□□□ -1.2
USP3-219ENST00000561326 IGHV3-16A0A0C4DH30 117 aa7.53□□□□□ -1.2
USP3-219ENST00000561326 A0A1B0GXF2 115 aa7.53□□□□□ -1.2
USP3-219ENST00000561326 APCSP02743 223 aa7.53□□□□□ -1.2
USP3-219ENST00000561326 TMEM136Q6ZRR5 245 aa7.53□□□□□ -1.2
USP3-219ENST00000561326 SYT8Q8NBV8 401 aa7.53□□□□□ -1.2
USP3-219ENST00000561326 MRPL18Q9H0U6 180 aaKnown RBP7.53□□□□□ -1.2
USP3-219ENST00000561326 IGHV4-4A0A075B6R2 117 aa7.52□□□□□ -1.21
USP3-219ENST00000561326 IGHV3OR16-12A0A075B7B8 117 aa7.52□□□□□ -1.21
USP3-219ENST00000561326 UBE2CO00762 179 aa7.52□□□□□ -1.21
USP3-219ENST00000561326 TRGC1P0CF51 173 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms