RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 LEPP41159 167 aa9.62□□□□□ -0.87
SNX1-211ENST00000560829 C12orf57Q99622 126 aa9.62□□□□□ -0.87
SNX1-211ENST00000560829 SPAG8Q99932 426 aaPredicted RBP9.62□□□□□ -0.87
SNX1-211ENST00000560829 A8MTW9 85 aa9.61□□□□□ -0.87
SNX1-211ENST00000560829 CD33P20138 364 aa9.61□□□□□ -0.87
SNX1-211ENST00000560829 NTF3P20783 257 aa9.61□□□□□ -0.87
SNX1-211ENST00000560829 RNASE4P34096 147 aaKnown RBP9.61□□□□□ -0.87
SNX1-211ENST00000560829 IGHV4-4A0A075B6R2 117 aa9.6□□□□□ -0.87
SNX1-211ENST00000560829 J3KRW8 73 aa9.6□□□□□ -0.87
SNX1-211ENST00000560829 KIR3DS1Q14943 382 aa9.6□□□□□ -0.87
SNX1-211ENST00000560829 CD300EQ496F6 205 aaPredicted RBP9.6□□□□□ -0.87
SNX1-211ENST00000560829 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
SNX1-211ENST00000560829 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
SNX1-211ENST00000560829 FAM104BQ5XKR9 115 aa9.6□□□□□ -0.87
SNX1-211ENST00000560829 TMEM191AQ9H0A3 160 aa9.6□□□□□ -0.87
SNX1-211ENST00000560829 OR4C46A6NHA9 309 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 MED14OSP0DP75 135 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 TWIST1Q15672 202 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 AMTNQ6UX39 209 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 RCHY1Q96PM5 261 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 C7orf71A4D174 169 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 HLA-DRB4P13762 266 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 TSPOP30536 169 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 DEFB131AP59861 70 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 ANXA2RQ3ZCQ2 193 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 PYY3Q5JQD4 70 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 PRR31Q5SQ13 230 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 NDUFA11Q86Y39 141 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 KCNS1Q96KK3 526 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 ZNF256Q9Y2P7 627 aaPredicted RBP9.59□□□□□ -0.87
SNX1-211ENST00000560829 U3KQK5 164 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
SNX1-211ENST00000560829 MUC21A0A0G2JKD1 596 aa9.58□□□□□ -0.88
SNX1-211ENST00000560829 MUC21A0A140T8X8 626 aa9.58□□□□□ -0.88
SNX1-211ENST00000560829 ZNF324O75467 553 aaPredicted RBP9.58□□□□□ -0.88
SNX1-211ENST00000560829 KRTAP10-3P60369 221 aa9.58□□□□□ -0.88
SNX1-211ENST00000560829 CACNG7P62955 275 aa9.58□□□□□ -0.88
SNX1-211ENST00000560829 IQCJQ1A5X6 159 aa9.58□□□□□ -0.88
SNX1-211ENST00000560829 MUC21Q5SSG8 566 aa9.58□□□□□ -0.88
SNX1-211ENST00000560829 HIVEP1P15822 2718 aa9.58□□□□□ -0.88
SNX1-211ENST00000560829 ASIPP42127 132 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 CDKN1BP46527 198 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 TDRG1Q3Y452 100 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 OR10AG1Q8NH19 301 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 MSRB1Q9NZV6 116 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 NAGKQ9UJ70 344 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 NSD1Q96L73 2696 aaPredicted RBP9.57□□□□□ -0.88
SNX1-211ENST00000560829 H3BMM0 161 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
SNX1-211ENST00000560829 H3BVH4 76 aa9.56□□□□□ -0.88
SNX1-211ENST00000560829 JOSD1Q15040 202 aaPredicted RBP9.56□□□□□ -0.88
SNX1-211ENST00000560829 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 M0R2Z0 102 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 SSTP61278 116 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 MRPL51Q4U2R6 128 aaKnown RBP9.55□□□□□ -0.88
SNX1-211ENST00000560829 FAM159AQ6UWV7 190 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 RNF185Q96GF1 192 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 URB1-AS1Q96HZ7 61 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 CLUHP3Q96NS8 147 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 TRAV12-3A0A0B4J271 114 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 IGKV3-20P01619 116 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 RNASE3P12724 160 aaKnown RBP9.55□□□□□ -0.88
SNX1-211ENST00000560829 RAB4AP20338 218 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 S100A4P26447 101 aaKnown RBP9.55□□□□□ -0.88
SNX1-211ENST00000560829 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 NSUN5P1Q3KNT7 163 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 SPANXN1Q5VSR9 72 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 NIT1Q86X76 327 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 ORMDL3Q8N138 153 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 OR2K2Q8NGT1 345 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
SNX1-211ENST00000560829 SAMD10Q9BYL1 202 aa9.55□□□□□ -0.88
SNX1-211ENST00000560829 FN1P02751 2386 aaKnown RBP9.54□□□□□ -0.88
SNX1-211ENST00000560829 D6R8Y8 96 aa9.54□□□□□ -0.88
SNX1-211ENST00000560829 GNRH2O43555 120 aa9.54□□□□□ -0.88
SNX1-211ENST00000560829 IGLV1-51P01701 117 aa9.54□□□□□ -0.88
SNX1-211ENST00000560829 ODF3L2Q3SX64 289 aa9.54□□□□□ -0.88
SNX1-211ENST00000560829 TRAV12-2A0A075B6T6 113 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 HSBP1O75506 76 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 NXPH4O95158 308 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 PPBPP02775 128 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 AMTP48728 403 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 SMIM15Q7Z3B0 74 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 RBMY1BA6NDE4 496 aaKnown RBP9.53□□□□□ -0.88
SNX1-211ENST00000560829 RBMY1EA6NEQ0 496 aaKnown RBP9.53□□□□□ -0.88
SNX1-211ENST00000560829 CRXO43186 299 aaPredicted RBP9.53□□□□□ -0.88
SNX1-211ENST00000560829 SAP30O75446 220 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 RBMY1DP0C7P1 496 aaKnown RBP9.53□□□□□ -0.88
SNX1-211ENST00000560829 ZNF124Q15973 351 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 PRELID3AQ96N28 172 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 NIT2Q9NQR4 276 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 LAMTOR2Q9Y2Q5 125 aa9.53□□□□□ -0.88
SNX1-211ENST00000560829 IGHV1OR15-1A0A075B7D0 117 aa9.52□□□□□ -0.89
SNX1-211ENST00000560829 LINC00614P0C842 121 aa9.52□□□□□ -0.89
SNX1-211ENST00000560829 PMCHP20382 165 aa9.52□□□□□ -0.89
SNX1-211ENST00000560829 EVI2AP22794 236 aa9.52□□□□□ -0.89
SNX1-211ENST00000560829 CKS2P33552 79 aa9.52□□□□□ -0.89
SNX1-211ENST00000560829 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms