RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PSMG3Q9BT73 122 aaPredicted RBP0.83□□□□□ -2.28
GABPB1-209ENST00000559100 TAS2R8Q9NYW2 309 aa0.83□□□□□ -2.28
GABPB1-209ENST00000559100 LSM2Q9Y333 95 aaKnown RBP0.83□□□□□ -2.28
GABPB1-209ENST00000559100 PTPRFP10586 1907 aa0.83□□□□□ -2.28
GABPB1-209ENST00000559100 SYNJ1O43426 1573 aa0.83□□□□□ -2.28
GABPB1-209ENST00000559100 ADGRB2O60241 1585 aa0.83□□□□□ -2.28
GABPB1-209ENST00000559100 ARHGAP31Q2M1Z3 1444 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 ERBINQ96RT1 1412 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 TRBV20-1A0A075B6N2 111 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 J3QLW9 94 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 NCR2O95944 276 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 GYPBP06028 91 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 PDE6GP18545 87 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 RPS25P62851 125 aaKnown RBP0.82□□□□□ -2.28
GABPB1-209ENST00000559100 LYPD5Q6UWN5 251 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 SLC25A26Q70HW3 274 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 ATOH7Q8N100 152 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 ATG5Q9H1Y0 275 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 SAR1AQ9NR31 198 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 CRCT1Q9UGL9 99 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 KIAA1549Q9HCM3 1950 aa0.82□□□□□ -2.28
GABPB1-209ENST00000559100 NUPR2A6NF83 97 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 A6NN06 94 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 ZNF670-ZNF695F2Z2N8 137 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 NPFFO15130 113 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 IGHV3-30P01768 117 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 APOC1P02654 83 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 TFF1P04155 84 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 TSPAN19P0C672 248 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 IGHV3-30-5P0DP03 117 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 GUCA1AP43080 201 aaPredicted RBP0.81□□□□□ -2.28
GABPB1-209ENST00000559100 EFNA4P52798 201 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 ATP11AUNQ6ZP68 121 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 DYNLRB2Q8TF09 96 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 ARL11Q969Q4 196 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 ERG28Q9UKR5 140 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 PLXNA4Q9HCM2 1894 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 USP54Q70EL1 1684 aa0.81□□□□□ -2.28
GABPB1-209ENST00000559100 CHD3Q12873 2000 aaKnown RBP0.81□□□□□ -2.28
GABPB1-209ENST00000559100 ZCCHC6Q5VYS8 1495 aaKnown RBP0.8□□□□□ -2.28
GABPB1-209ENST00000559100 SIP14410 1827 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 CACNA1BQ00975 2339 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 TNRC6AQ8NDV7 1962 aaKnown RBP0.8□□□□□ -2.28
GABPB1-209ENST00000559100 CASP8AP2Q9UKL3 1982 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 A6NIN4 97 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 M0R2P5 195 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 NDUFA2O43678 99 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 IGF2P01344 180 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 RRAS2P62070 204 aaPredicted RBP0.8□□□□□ -2.28
GABPB1-209ENST00000559100 MIC13Q5XKP0 118 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 RPL7L1Q6DKI1 246 aaKnown RBP0.8□□□□□ -2.28
GABPB1-209ENST00000559100 Q6ZQY7 126 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 KCNRGQ8N5I3 272 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 PPDPFLQ8WWR9 84 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 DMAC1Q96GE9 116 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.8□□□□□ -2.28
GABPB1-209ENST00000559100 ERCC6Q03468 1493 aa0.8□□□□□ -2.28
GABPB1-209ENST00000559100 ALPK3Q96L96 1907 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 RP1L1Q8IWN7 2480 aaPredicted RBP0.79□□□□□ -2.28
GABPB1-209ENST00000559100 FCGBPQ9Y6R7 5405 aaPredicted RBP0.79□□□□□ -2.28
GABPB1-209ENST00000559100 E9PCH4 1651 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 TRAV2A0A0B4J234 112 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 TRBV10-1A0A0K0K1A3 114 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 TRBV30A0A0K0K1B3 111 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 LOC101927531A0A1B0GV80 90 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 FAM92AA1XBS5 289 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 HIGD1CA8MV81 97 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 GNG7O60262 68 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 SNCGO76070 127 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 CCKP06307 115 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 PYYP10082 97 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 SBSPONQ8IVN8 264 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 CPDO75976 1380 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 MYH1P12882 1939 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 IBTKQ9P2D0 1353 aaPredicted RBP0.79□□□□□ -2.28
GABPB1-209ENST00000559100 PRG4Q92954 1404 aaPredicted RBP0.79□□□□□ -2.28
GABPB1-209ENST00000559100 UHRF1BP1LA0JNW5 1464 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 MYO18AQ92614 2054 aaKnown RBP0.79□□□□□ -2.28
GABPB1-209ENST00000559100 TECTAO75443 2155 aa0.79□□□□□ -2.28
GABPB1-209ENST00000559100 VIRMAQ69YN4 1812 aaKnown RBP0.78□□□□□ -2.28
GABPB1-209ENST00000559100 MCM3APO60318 1980 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 EFCAB10A6NFE3 127 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 FXYD1O00168 92 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 IL5P05113 134 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 SLC25A6P12236 298 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 SELENOWP63302 87 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 SPCS2Q15005 226 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 XAF1Q6GPH4 301 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 SCIMPQ6UWF3 145 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 LINC00575Q6W349 94 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 Q6ZUT4 128 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 VSTM2AQ8TAG5 236 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 CCL19Q99731 98 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 PDCD10Q9BUL8 212 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 TMEM191AQ9H0A3 160 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 MRPL35Q9NZE8 188 aaKnown RBP0.78□□□□□ -2.28
GABPB1-209ENST00000559100 CCDC167Q9P0B6 97 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 MUC4Q99102 2169 aa0.78□□□□□ -2.28
GABPB1-209ENST00000559100 PRRC2BQ5JSZ5 2229 aaKnown RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms