RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TDRG1Q3Y452 100 aa13.15□□□□□ -0.3
CLPX-203ENST00000558958 ANXA2RQ3ZCQ2 193 aa13.15□□□□□ -0.3
CLPX-203ENST00000558958 ATRAIDQ6UW56 229 aa13.15□□□□□ -0.3
CLPX-203ENST00000558958 ZNF575Q86XF7 245 aa13.15□□□□□ -0.3
CLPX-203ENST00000558958 TMEM256Q8N2U0 113 aa13.15□□□□□ -0.3
CLPX-203ENST00000558958 RPS10P5Q9NQ39 176 aa13.15□□□□□ -0.3
CLPX-203ENST00000558958 IGHV1OR15-1A0A075B7D0 117 aa13.14□□□□□ -0.31
CLPX-203ENST00000558958 H7BYZ3 331 aa13.14□□□□□ -0.31
CLPX-203ENST00000558958 CT83Q5H943 113 aa13.14□□□□□ -0.31
CLPX-203ENST00000558958 FAM159AQ6UWV7 190 aa13.14□□□□□ -0.31
CLPX-203ENST00000558958 LINC01587Q99440 93 aa13.14□□□□□ -0.31
CLPX-203ENST00000558958 PYGO2Q9BRQ0 406 aa13.14□□□□□ -0.31
CLPX-203ENST00000558958 CTDSP1Q9GZU7 261 aa13.14□□□□□ -0.31
CLPX-203ENST00000558958 GOLT1BQ9Y3E0 138 aa13.14□□□□□ -0.31
CLPX-203ENST00000558958 A0A087WWC5 75 aa13.13□□□□□ -0.31
CLPX-203ENST00000558958 ZNF705AQ6ZN79 300 aaPredicted RBP13.13□□□□□ -0.31
CLPX-203ENST00000558958 KCNS1Q96KK3 526 aa13.13□□□□□ -0.31
CLPX-203ENST00000558958 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
CLPX-203ENST00000558958 TMEM208Q9BTX3 173 aa13.13□□□□□ -0.31
CLPX-203ENST00000558958 TMSB15BA0A087X1C1 80 aa13.12□□□□□ -0.31
CLPX-203ENST00000558958 RPS20P60866 119 aaKnown RBP13.12□□□□□ -0.31
CLPX-203ENST00000558958 TMEM242Q9NWH2 141 aa13.12□□□□□ -0.31
CLPX-203ENST00000558958 NBEAL2Q6ZNJ1 2754 aa13.11□□□□□ -0.31
CLPX-203ENST00000558958 IGHV3OR16-12A0A075B7B8 117 aa13.11□□□□□ -0.31
CLPX-203ENST00000558958 A8MWL6 223 aa13.11□□□□□ -0.31
CLPX-203ENST00000558958 DEFB135Q30KP9 77 aa13.11□□□□□ -0.31
CLPX-203ENST00000558958 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
CLPX-203ENST00000558958 Q6ZWC4 215 aa13.11□□□□□ -0.31
CLPX-203ENST00000558958 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 GNRH2O43555 120 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 TYMSP04818 313 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 TSKUQ8WUA8 353 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 TP53TG3Q9ULZ0 132 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 GRIFINA4D1Z8 144 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 PRM2P04554 102 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 CXCL1P09341 107 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 GZMBP10144 247 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 HTN1P15515 57 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 RCHY1Q96PM5 261 aa13.1□□□□□ -0.31
CLPX-203ENST00000558958 CBY3A6NI87 242 aa13.09□□□□□ -0.31
CLPX-203ENST00000558958 DNLZQ5SXM8 178 aa13.09□□□□□ -0.31
CLPX-203ENST00000558958 RNF183Q96D59 192 aa13.09□□□□□ -0.31
CLPX-203ENST00000558958 IL36BQ9NZH7 164 aa13.09□□□□□ -0.31
CLPX-203ENST00000558958 SMIM27A0A1W2PRY6 76 aa13.08□□□□□ -0.32
CLPX-203ENST00000558958 FAM231BA6NCW3 169 aa13.08□□□□□ -0.32
CLPX-203ENST00000558958 GTSF1Q8WW33 167 aa13.08□□□□□ -0.32
CLPX-203ENST00000558958 NEU1Q99519 415 aa13.08□□□□□ -0.32
CLPX-203ENST00000558958 GFRA4Q9GZZ7 299 aa13.08□□□□□ -0.32
CLPX-203ENST00000558958 TRGV11A0A075B6L2 103 aa13.07□□□□□ -0.32
CLPX-203ENST00000558958 IGHV3-16A0A0C4DH30 117 aa13.07□□□□□ -0.32
CLPX-203ENST00000558958 IGLC6P0CF74 106 aa13.07□□□□□ -0.32
CLPX-203ENST00000558958 AZU1P20160 251 aa13.07□□□□□ -0.32
CLPX-203ENST00000558958 ASIPP42127 132 aa13.07□□□□□ -0.32
CLPX-203ENST00000558958 MRAPQ8TCY5 172 aa13.07□□□□□ -0.32
CLPX-203ENST00000558958 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
CLPX-203ENST00000558958 X6R8D5 127 aa13.07□□□□□ -0.32
CLPX-203ENST00000558958 SPRY2O43597 315 aa13.06□□□□□ -0.32
CLPX-203ENST00000558958 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
CLPX-203ENST00000558958 TCL1AP56279 114 aa13.06□□□□□ -0.32
CLPX-203ENST00000558958 SBSPONQ8IVN8 264 aa13.06□□□□□ -0.32
CLPX-203ENST00000558958 MDFICQ9P1T7 246 aa13.06□□□□□ -0.32
CLPX-203ENST00000558958 TP53TG1Q9Y2A0 90 aa13.06□□□□□ -0.32
CLPX-203ENST00000558958 A0A1W2PPQ1 181 aa13.05□□□□□ -0.32
CLPX-203ENST00000558958 CXorf65A6NEN9 183 aa13.05□□□□□ -0.32
CLPX-203ENST00000558958 HIGD1CA8MV81 97 aa13.05□□□□□ -0.32
CLPX-203ENST00000558958 RNASE3P12724 160 aaKnown RBP13.05□□□□□ -0.32
CLPX-203ENST00000558958 S100A4P26447 101 aaKnown RBP13.05□□□□□ -0.32
CLPX-203ENST00000558958 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
CLPX-203ENST00000558958 MEGF8Q7Z7M0 2845 aa13.05□□□□□ -0.32
CLPX-203ENST00000558958 SMIM9A6NGZ8 99 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 H3BVH4 76 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 ARMS2P0C7Q2 107 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 FER1L6-AS1Q8NA97 138 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 C11orf72Q8NBR9 251 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 OR11H2Q8NH07 326 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 RNASE8Q8TDE3 154 aaKnown RBP13.04□□□□□ -0.32
CLPX-203ENST00000558958 TMEM263Q8WUH6 116 aaKnown RBP13.04□□□□□ -0.32
CLPX-203ENST00000558958 OVOL2Q9BRP0 275 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 SSBP4Q9BWG4 385 aaPredicted RBP13.04□□□□□ -0.32
CLPX-203ENST00000558958 NAT8BQ9UHF3 227 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 SNAI2O43623 268 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 SCO1O75880 301 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 MED14OSP0DP75 135 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 FAM3BP58499 235 aaPredicted RBP13.04□□□□□ -0.32
CLPX-203ENST00000558958 ZNF493Q6ZR52 646 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 NUP35Q8NFH5 326 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 TPPP3Q9BW30 176 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 SCRT2Q9NQ03 307 aa13.04□□□□□ -0.32
CLPX-203ENST00000558958 OR5AL1P0C617 328 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 CTRLP40313 264 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 DEFA6Q01524 100 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 LYZL1Q6UWQ5 148 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 CBLN2Q8IUK8 224 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 PGLYRP4Q96LB8 373 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 GSN-AS1Q9NRJ2 163 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 SMCO4Q9NRQ5 59 aa13.03□□□□□ -0.32
CLPX-203ENST00000558958 URGCP-MRPS24S4R325 110 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms