RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 BLOC1S1P78537 153 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 Q6ZTI0 123 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 C18orf15Q96N68 181 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 C8orf49Q96NF6 230 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 SPXQ9BT56 116 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 SDF2L1Q9HCN8 221 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 TRAV34A0A0B4J273 112 aa8.79□□□□□ -1
SLIRP-209ENST00000557342 PAGE4O60829 102 aa8.79□□□□□ -1
SLIRP-209ENST00000557342 GCGP01275 180 aa8.79□□□□□ -1
SLIRP-209ENST00000557342 PFN1P07737 140 aaKnown RBP8.79□□□□□ -1
SLIRP-209ENST00000557342 TMEM183BQ1AE95 376 aa8.79□□□□□ -1
SLIRP-209ENST00000557342 TMEM183AQ8IXX5 376 aa8.79□□□□□ -1
SLIRP-209ENST00000557342 FMC1Q96HJ9 113 aa8.79□□□□□ -1
SLIRP-209ENST00000557342 SACSQ9NZJ4 4579 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 ALMS1Q8TCU4 4167 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 TRAV1-1A0A0B4J248 108 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 A0A1B0GV50 99 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 UBE2G1P62253 170 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 OR5I1Q13606 314 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 LYPD6BQ8NI32 183 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 LINC00479Q96M42 142 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 MDFICQ9P1T7 246 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 ZFP30Q9Y2G7 519 aa8.78□□□□□ -1
SLIRP-209ENST00000557342 TRBV6-1A0A0K0K1D8 114 aa8.77□□□□□ -1.01
SLIRP-209ENST00000557342 TYMSP04818 313 aa8.77□□□□□ -1.01
SLIRP-209ENST00000557342 AKR1C3P42330 323 aa8.77□□□□□ -1.01
SLIRP-209ENST00000557342 ZNF80P51504 273 aaPredicted RBP8.77□□□□□ -1.01
SLIRP-209ENST00000557342 Q86TA4 180 aa8.77□□□□□ -1.01
SLIRP-209ENST00000557342 UBE2DNLQ8IWF7 75 aa8.77□□□□□ -1.01
SLIRP-209ENST00000557342 POM121L12Q8N7R1 296 aa8.77□□□□□ -1.01
SLIRP-209ENST00000557342 MANBALQ9NQG1 85 aa8.77□□□□□ -1.01
SLIRP-209ENST00000557342 IGHV3-16A0A0C4DH30 117 aa8.76□□□□□ -1.01
SLIRP-209ENST00000557342 FABP5P3A8MUU1 101 aa8.76□□□□□ -1.01
SLIRP-209ENST00000557342 H3BNG1 76 aa8.76□□□□□ -1.01
SLIRP-209ENST00000557342 GNRH2O43555 120 aa8.76□□□□□ -1.01
SLIRP-209ENST00000557342 NUDT3O95989 172 aa8.76□□□□□ -1.01
SLIRP-209ENST00000557342 S100A9P06702 114 aaKnown RBP8.76□□□□□ -1.01
SLIRP-209ENST00000557342 RNF212Q495C1 297 aa8.76□□□□□ -1.01
SLIRP-209ENST00000557342 PCNPQ8WW12 178 aaKnown RBP8.76□□□□□ -1.01
SLIRP-209ENST00000557342 MED9Q9NWA0 146 aa8.76□□□□□ -1.01
SLIRP-209ENST00000557342 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
SLIRP-209ENST00000557342 MUC4Q99102 2169 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 TRAV26-1A0A087WT03 109 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 LINC00862A6NCI5 91 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 M0R2P5 195 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 HOXA5P20719 270 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 SLAQ13239 276 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 COX8CQ7Z4L0 72 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 RASL10AQ92737 203 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 TXNDC17Q9BRA2 123 aa8.75□□□□□ -1.01
SLIRP-209ENST00000557342 LTAP01374 205 aa8.74□□□□□ -1.01
SLIRP-209ENST00000557342 FAM3BP58499 235 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-209ENST00000557342 GNG13Q9P2W3 67 aa8.74□□□□□ -1.01
SLIRP-209ENST00000557342 NACAE9PAV3 2078 aa8.74□□□□□ -1.01
SLIRP-209ENST00000557342 RYR2Q92736 4967 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 A0A0J9YY99 117 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 SCO2A0A1W2PP80 73 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 IFNA1P01562 189 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 CCL18P55774 89 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 CCL20P78556 96 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 NDUFA5Q16718 116 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 FAM162BQ5T6X4 162 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 ZC2HC1AQ96GY0 325 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 C11orf21Q9P2W6 132 aa8.73□□□□□ -1.01
SLIRP-209ENST00000557342 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
SLIRP-209ENST00000557342 TRAV4A0A0B4J268 109 aa8.72□□□□□ -1.01
SLIRP-209ENST00000557342 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
SLIRP-209ENST00000557342 IGHV3-53P01767 116 aa8.72□□□□□ -1.01
SLIRP-209ENST00000557342 TAGLN2P37802 199 aaKnown RBP8.72□□□□□ -1.01
SLIRP-209ENST00000557342 PRO0255Q9UI72 69 aa8.72□□□□□ -1.01
SLIRP-209ENST00000557342 IGKV3D-20A0A0C4DH25 116 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 PAX4O43316 350 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 SH2D1AO60880 128 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 ORM1P02763 201 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 S100A4P26447 101 aaKnown RBP8.71□□□□□ -1.02
SLIRP-209ENST00000557342 ASIPP42127 132 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 CRIP1P50238 77 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 ZNF674Q2M3X9 581 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 OR4C5Q8NGB2 326 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 C11orf52Q96A22 123 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 PTH2Q96A98 100 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 C9orf85Q96MD7 179 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 HHLA3Q9XRX5 114 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 HYDINQ4G0P3 5121 aa8.71□□□□□ -1.02
SLIRP-209ENST00000557342 RAB19A4D1S5 217 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 B4DEV8 164 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 PDE6DO43924 150 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 CIDEAO60543 219 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 CRYBA4P53673 196 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 MEF2BQ02080 365 aaPredicted RBP8.7□□□□□ -1.02
SLIRP-209ENST00000557342 FHL2Q14192 279 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 COMMD7Q86VX2 200 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 BAGE2Q86Y30 109 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 FAM210AQ96ND0 272 aa8.7□□□□□ -1.02
SLIRP-209ENST00000557342 KRBOX1C9JBD0 128 aa8.69□□□□□ -1.02
SLIRP-209ENST00000557342 C9JCJ5 164 aa8.69□□□□□ -1.02
SLIRP-209ENST00000557342 SFTA3P0C7M3 94 aa8.69□□□□□ -1.02
SLIRP-209ENST00000557342 BCL2P10415 239 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms