RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 DPPA3Q6W0C5 159 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 Q86TA4 180 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 SFT2D1Q8WV19 159 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 NKX6-2Q9C056 277 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-219ENST00000555563 SDF2L1Q9HCN8 221 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 ARL2-SNX15V9GYD0 113 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 KMT2AQ03164 3969 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 IGHV3-16A0A0C4DH30 117 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 GNRH2O43555 120 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 IGHV3-53P01767 116 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 C1QBP02746 253 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 PFN1P07737 140 aaKnown RBP9.57□□□□□ -0.88
SHMT2-219ENST00000555563 PPT1P50897 306 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 LGALSLQ3ZCW2 172 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-219ENST00000555563 ZFP69Q49AA0 526 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 SMUG1Q53HV7 270 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 AKAP14Q86UN6 197 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 MBD3L1Q8WWY6 194 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 HIST1H2BAQ96A08 127 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 NACAE9PAV3 2078 aa9.57□□□□□ -0.88
SHMT2-219ENST00000555563 SAPCD1Q5SSQ6 148 aa9.56□□□□□ -0.88
SHMT2-219ENST00000555563 CST9LP1Q5W188 147 aa9.56□□□□□ -0.88
SHMT2-219ENST00000555563 SPXQ9BT56 116 aa9.56□□□□□ -0.88
SHMT2-219ENST00000555563 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 H3BNG1 76 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 M0R2N4 97 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 PAGE4O60829 102 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 H2AFB1P0C5Y9 115 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 RASL10AQ92737 203 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 VSIG2Q96IQ7 327 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 KCNS1Q96KK3 526 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 TCEAL7Q9BRU2 100 aa9.55□□□□□ -0.88
SHMT2-219ENST00000555563 FAM3BP58499 235 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-219ENST00000555563 FMC1Q96HJ9 113 aa9.54□□□□□ -0.88
SHMT2-219ENST00000555563 LINC00588Q9Y4M8 146 aa9.54□□□□□ -0.88
SHMT2-219ENST00000555563 FRAS1Q86XX4 4008 aa9.54□□□□□ -0.88
SHMT2-219ENST00000555563 MUC4Q99102 2169 aa9.54□□□□□ -0.88
SHMT2-219ENST00000555563 M0R2P5 195 aa9.53□□□□□ -0.88
SHMT2-219ENST00000555563 SFTA3P0C7M3 94 aa9.53□□□□□ -0.88
SHMT2-219ENST00000555563 AKR1C3P42330 323 aa9.53□□□□□ -0.88
SHMT2-219ENST00000555563 CCL18P55774 89 aa9.53□□□□□ -0.88
SHMT2-219ENST00000555563 UBE2G1P62253 170 aa9.53□□□□□ -0.88
SHMT2-219ENST00000555563 EIF5AL1Q6IS14 154 aaKnown RBP9.53□□□□□ -0.88
SHMT2-219ENST00000555563 ZC2HC1AQ96GY0 325 aa9.53□□□□□ -0.88
SHMT2-219ENST00000555563 A0A096LPF7 62 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 SCO2A0A1W2PP80 73 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 RAB5CP51148 216 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 FHL2Q14192 279 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 Q6ZR54 194 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 C9orf62Q8N4C0 152 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 ZNRF2Q8NHG8 242 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 ZNF479Q96JC4 524 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 C9orf85Q96MD7 179 aa9.52□□□□□ -0.89
SHMT2-219ENST00000555563 HERC2O95714 4834 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 IGKV3D-20A0A0C4DH25 116 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 TRGV4A0A0C4DH28 118 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 PAX4O43316 350 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 LTAP01374 205 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 SULT1A2P50226 295 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 CRYBA4P53673 196 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 COX8CQ7Z4L0 72 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 SLC51BQ86UW2 128 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 PRO0255Q9UI72 69 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 ZFP30Q9Y2G7 519 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 VPS13DQ5THJ4 4388 aa9.51□□□□□ -0.89
SHMT2-219ENST00000555563 TRAV1-1A0A0B4J248 108 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 A0A1B0GVG6 124 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 FABP5P3A8MUU1 101 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 SH2D1AO60880 128 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 RNASE3P12724 160 aaKnown RBP9.5□□□□□ -0.89
SHMT2-219ENST00000555563 CCL20P78556 96 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 ESRGQ1W209 222 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 GNG13Q9P2W3 67 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 HHLA3Q9XRX5 114 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 ICOSQ9Y6W8 199 aa9.5□□□□□ -0.89
SHMT2-219ENST00000555563 C9JCJ5 164 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 CRIP1P50238 77 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 SLAQ13239 276 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 ZNF876PQ49A33 203 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 FAM162BQ5T6X4 162 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 NHLRC2Q8NBF2 726 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 OR4C5Q8NGB2 326 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 MANBALQ9NQG1 85 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 DNAH6Q9C0G6 4158 aa9.49□□□□□ -0.89
SHMT2-219ENST00000555563 B4DEV8 164 aa9.48□□□□□ -0.89
SHMT2-219ENST00000555563 M0R036 132 aa9.48□□□□□ -0.89
SHMT2-219ENST00000555563 ASIPP42127 132 aa9.48□□□□□ -0.89
SHMT2-219ENST00000555563 ZNF506Q5JVG8 444 aa9.48□□□□□ -0.89
SHMT2-219ENST00000555563 MRPS16Q9Y3D3 137 aaKnown RBP9.48□□□□□ -0.89
SHMT2-219ENST00000555563 PGPEP1LA6NFU8 196 aa9.47□□□□□ -0.89
SHMT2-219ENST00000555563 RTL8CO15255 209 aa9.47□□□□□ -0.89
SHMT2-219ENST00000555563 ORM1P02763 201 aa9.47□□□□□ -0.89
SHMT2-219ENST00000555563 S100A4P26447 101 aaKnown RBP9.47□□□□□ -0.89
SHMT2-219ENST00000555563 ZNF674Q2M3X9 581 aa9.47□□□□□ -0.89
SHMT2-219ENST00000555563 C11orf52Q96A22 123 aa9.47□□□□□ -0.89
SHMT2-219ENST00000555563 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
SHMT2-219ENST00000555563 NBDYA0A0U1RRE5 68 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms