RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 CXCL1P09341 107 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 CRISP2P16562 243 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 FAM3BP58499 235 aaPredicted RBP7.93□□□□□ -1.14
SHMT2-218ENST00000555213 IBA57Q5T440 356 aaKnown RBP7.93□□□□□ -1.14
SHMT2-218ENST00000555213 PRR27Q6MZM9 219 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 TMEM256Q8N2U0 113 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 IMMP2LQ96T52 175 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 NDFIP1Q9BT67 221 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 LENEPQ9Y5L5 61 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 TRAV12-2A0A075B6T6 113 aa7.92□□□□□ -1.14
SHMT2-218ENST00000555213 SMIM27A0A1W2PRY6 76 aa7.92□□□□□ -1.14
SHMT2-218ENST00000555213 GATCO43716 136 aaKnown RBP7.92□□□□□ -1.14
SHMT2-218ENST00000555213 SH2D1AO60880 128 aa7.92□□□□□ -1.14
SHMT2-218ENST00000555213 MIFP14174 115 aa7.92□□□□□ -1.14
SHMT2-218ENST00000555213 SMUG1Q53HV7 270 aa7.92□□□□□ -1.14
SHMT2-218ENST00000555213 ZNF705AQ6ZN79 300 aaPredicted RBP7.92□□□□□ -1.14
SHMT2-218ENST00000555213 CSNK1G2-AS1Q8NCQ2 148 aa7.92□□□□□ -1.14
SHMT2-218ENST00000555213 C20orf144Q9BQM9 153 aa7.92□□□□□ -1.14
SHMT2-218ENST00000555213 IL36BQ9NZH7 164 aa7.92□□□□□ -1.14
SHMT2-218ENST00000555213 TGIF2-C20orf24A0A0A6YYL0 155 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 SMIM9A6NGZ8 99 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 KLLNB2CW77 178 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 J3KRW8 73 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 GPX1P07203 203 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 GFI1BQ5VTD9 330 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 C15orf54Q8N8G6 183 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 GTSF1Q8WW33 167 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 NEU1Q99519 415 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 C11orf68Q9H3H3 251 aaKnown RBP7.91□□□□□ -1.14
SHMT2-218ENST00000555213 BIN3Q9NQY0 253 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 URGCP-MRPS24S4R325 110 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 STAB2Q8WWQ8 2551 aa7.91□□□□□ -1.14
SHMT2-218ENST00000555213 TRBV24-1A0A075B6N3 115 aa7.9□□□□□ -1.14
SHMT2-218ENST00000555213 IGKV3D-20A0A0C4DH25 116 aa7.9□□□□□ -1.14
SHMT2-218ENST00000555213 C7orf71A4D174 169 aa7.9□□□□□ -1.14
SHMT2-218ENST00000555213 TMEM189A5PLL7 270 aa7.9□□□□□ -1.14
SHMT2-218ENST00000555213 FABP5P3A8MUU1 101 aa7.9□□□□□ -1.14
SHMT2-218ENST00000555213 ZNF705GA8MUZ8 300 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-218ENST00000555213 CRXO43186 299 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-218ENST00000555213 ZNF324O75467 553 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-218ENST00000555213 FOXA3P55318 350 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-218ENST00000555213 RPL19P84098 196 aaKnown RBP7.9□□□□□ -1.14
SHMT2-218ENST00000555213 FAM162BQ5T6X4 162 aa7.9□□□□□ -1.14
SHMT2-218ENST00000555213 WWC2-AS2Q96NR7 200 aa7.9□□□□□ -1.14
SHMT2-218ENST00000555213 LINC01587Q99440 93 aa7.9□□□□□ -1.14
SHMT2-218ENST00000555213 RPP21Q9H633 154 aaKnown RBP7.9□□□□□ -1.14
SHMT2-218ENST00000555213 IGHV4-28A0A0C4DH34 117 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 A0A0J9YWU9 116 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 P01737 135 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 GZMBP10144 247 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 RNASE4P34096 147 aaKnown RBP7.89□□□□□ -1.15
SHMT2-218ENST00000555213 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 CT83Q5H943 113 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 Q6AWC8 147 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 C1orf158Q8N1D5 194 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 IL17DQ8TAD2 202 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 TSKUQ8WUA8 353 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 X6R8D5 127 aa7.89□□□□□ -1.15
SHMT2-218ENST00000555213 TRAV12-3A0A0B4J271 114 aa7.88□□□□□ -1.15
SHMT2-218ENST00000555213 LINC01559Q495D7 138 aa7.88□□□□□ -1.15
SHMT2-218ENST00000555213 Q8NAQ8 132 aa7.88□□□□□ -1.15
SHMT2-218ENST00000555213 NUP35Q8NFH5 326 aa7.88□□□□□ -1.15
SHMT2-218ENST00000555213 OR2D3Q8NGH3 330 aa7.88□□□□□ -1.15
SHMT2-218ENST00000555213 DAZAP1Q96EP5 407 aaKnown RBP7.88□□□□□ -1.15
SHMT2-218ENST00000555213 EDA2RQ9HAV5 297 aa7.88□□□□□ -1.15
SHMT2-218ENST00000555213 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 FAM231BA6NCW3 169 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 A8MWL6 223 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 PHOX2AO14813 284 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 TYMSP04818 313 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 RBMY1A1P0DJD3 496 aaKnown RBP7.87□□□□□ -1.15
SHMT2-218ENST00000555213 RBMY1CP0DJD4 496 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 HTN1P15515 57 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 RAB5AP20339 215 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 TCL1AP56279 114 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 RBMY1FQ15415 496 aaKnown RBP7.87□□□□□ -1.15
SHMT2-218ENST00000555213 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.87□□□□□ -1.15
SHMT2-218ENST00000555213 FAM210BQ96KR6 192 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 GFRA4Q9GZZ7 299 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 TENM3Q9P273 2699 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 NBEAL2Q6ZNJ1 2754 aa7.87□□□□□ -1.15
SHMT2-218ENST00000555213 TRAV9-1A0A075B6T8 112 aa7.86□□□□□ -1.15
SHMT2-218ENST00000555213 TMSB15BA0A087X1C1 80 aa7.86□□□□□ -1.15
SHMT2-218ENST00000555213 DEFB4AO15263 64 aa7.86□□□□□ -1.15
SHMT2-218ENST00000555213 IGLC6P0CF74 106 aa7.86□□□□□ -1.15
SHMT2-218ENST00000555213 EMP1P54849 157 aa7.86□□□□□ -1.15
SHMT2-218ENST00000555213 ZNF493Q6ZR52 646 aa7.86□□□□□ -1.15
SHMT2-218ENST00000555213 TMEM263Q8WUH6 116 aaKnown RBP7.86□□□□□ -1.15
SHMT2-218ENST00000555213 C16orf74Q96GX8 76 aa7.86□□□□□ -1.15
SHMT2-218ENST00000555213 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
SHMT2-218ENST00000555213 TRAV21A0A0B4J279 112 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 A0A1W2PPQ1 181 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 GRIFINA4D1Z8 144 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 CBY3A6NI87 242 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 HIGD1CA8MV81 97 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 GNRH2O43555 120 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 ORM1P02763 201 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 ANXA2RQ3ZCQ2 193 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 KCNIP4Q6PIL6 250 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 LINC00467Q9BRT7 94 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms