RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 K7EMT4 169 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 HLA-DQA1P01909 254 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 FOXA3P55318 350 aaPredicted RBP9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 HBBP68871 147 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 KIR3DS1Q14943 382 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 TMEM86BQ8N661 226 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 RCHY1Q96PM5 261 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 UFC1Q9Y3C8 167 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 RBAKDNA6NC62 111 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 CCL25O15444 150 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 ORM1P02763 201 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 ZNF138P52744 262 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 ADAMTSL5Q6ZMM2 481 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 OR11H1Q8NG94 326 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 NDFIP1Q9BT67 221 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 GFRA4Q9GZZ7 299 aa9.61□□□□□ -0.87
VIPAS39-206ENST00000553888 SERF1AO75920 110 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 MT-ND6P03923 174 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 COX8CQ7Z4L0 72 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 LY6G6DO95868 133 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 HIST1H1AQ02539 215 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 KLHL30-AS1Q8NEE0 82 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 DCANP1Q8TF63 244 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 HIVEP1P15822 2718 aa9.6□□□□□ -0.87
VIPAS39-206ENST00000553888 CD33P20138 364 aa9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 MS4A6AQ9H2W1 248 aa9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 C2orf70A6NJV1 201 aa9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 HAX1O00165 279 aa9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 ZNF688P0C7X2 276 aa9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 ATP5L2Q7Z4Y8 100 aa9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 BAGE3Q86Y29 109 aa9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 TEX29Q8N6K0 151 aa9.59□□□□□ -0.87
VIPAS39-206ENST00000553888 IGKV3D-20A0A0C4DH25 116 aa9.58□□□□□ -0.88
VIPAS39-206ENST00000553888 CD28P10747 220 aa9.58□□□□□ -0.88
VIPAS39-206ENST00000553888 SS18L2Q9UHA2 77 aa9.58□□□□□ -0.88
VIPAS39-206ENST00000553888 A0A1B0GUT8 65 aa9.58□□□□□ -0.88
VIPAS39-206ENST00000553888 FABP5P3A8MUU1 101 aa9.58□□□□□ -0.88
VIPAS39-206ENST00000553888 KLF5Q13887 457 aaPredicted RBP9.58□□□□□ -0.88
VIPAS39-206ENST00000553888 RASL11AQ6T310 242 aa9.58□□□□□ -0.88
VIPAS39-206ENST00000553888 TSSC4Q9Y5U2 329 aaPredicted RBP9.58□□□□□ -0.88
VIPAS39-206ENST00000553888 FAM231BA6NCW3 169 aa9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 SPRY2O43597 315 aa9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 MSRB1Q9NZV6 116 aa9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 FN1P02751 2386 aaKnown RBP9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 COX19Q49B96 90 aa9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 OR8A1Q8NGG7 326 aa9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 OR10J6PQ8NGY7 276 aa9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 NSD1Q96L73 2696 aaPredicted RBP9.57□□□□□ -0.88
VIPAS39-206ENST00000553888 LINC01619G3V211 115 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 IGKV3-20P01619 116 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 PSMG4Q5JS54 123 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 OR1N2Q8NGR9 330 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 LINC01006Q8NI28 216 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 C18orf32Q8TCD1 76 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 C4orf3Q8WVX3 66 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 LGALS9O00182 355 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 SAMD13Q5VXD3 122 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
VIPAS39-206ENST00000553888 FER1L6-AS1Q8NA97 138 aa9.55□□□□□ -0.88
VIPAS39-206ENST00000553888 FLNBO75369 2602 aaKnown RBP9.55□□□□□ -0.88
VIPAS39-206ENST00000553888 OVOL1O14753 267 aa9.55□□□□□ -0.88
VIPAS39-206ENST00000553888 RNASE1P07998 156 aaKnown RBP9.55□□□□□ -0.88
VIPAS39-206ENST00000553888 Q0VG73 95 aa9.55□□□□□ -0.88
VIPAS39-206ENST00000553888 F8WDY8 70 aa9.55□□□□□ -0.88
VIPAS39-206ENST00000553888 IGLC6P0CF74 106 aa9.55□□□□□ -0.88
VIPAS39-206ENST00000553888 RAX2Q96IS3 184 aa9.55□□□□□ -0.88
VIPAS39-206ENST00000553888 INAFM1C9JVW0 142 aa9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 RNASE4P34096 147 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 LINC01559Q495D7 138 aa9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 FAM19A2Q8N3H0 131 aa9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 RNF114Q9Y508 228 aa9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 NTF3P20783 257 aa9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 RIGQ13278 110 aa9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 TIMM8BQ9Y5J9 83 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-206ENST00000553888 K7EQG2 157 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 PMCHP20382 165 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 HILS1P60008 231 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 AMN1Q8IY45 258 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 OR9G4Q8NGQ1 327 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 LINC00477Q96M19 166 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 TWIST1Q15672 202 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 OR10J3Q5JRS4 329 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 ZNF664Q8N3J9 261 aa9.53□□□□□ -0.88
VIPAS39-206ENST00000553888 GPX1P07203 203 aa9.52□□□□□ -0.88
VIPAS39-206ENST00000553888 CTRLP40313 264 aa9.52□□□□□ -0.88
VIPAS39-206ENST00000553888 SMIM20Q8N5G0 67 aa9.52□□□□□ -0.88
VIPAS39-206ENST00000553888 ZNF418Q8TF45 676 aaPredicted RBP9.52□□□□□ -0.88
VIPAS39-206ENST00000553888 URB1-AS1Q96HZ7 61 aa9.52□□□□□ -0.88
VIPAS39-206ENST00000553888 FAM19A4Q96LR4 140 aa9.52□□□□□ -0.88
VIPAS39-206ENST00000553888 MRPL23Q16540 153 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-206ENST00000553888 BORCS7Q96B45 105 aa9.52□□□□□ -0.89
VIPAS39-206ENST00000553888 PMCHL1Q16048 86 aa9.52□□□□□ -0.89
VIPAS39-206ENST00000553888 Q6AWC8 147 aa9.52□□□□□ -0.89
VIPAS39-206ENST00000553888 Q6ZWC4 215 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms