RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 BRK1Q8WUW1 75 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 S100A16Q96FQ6 103 aaKnown RBP1.27□□□□□ -2.21
VRK1-202ENST00000553683 C2orf50Q96LR7 162 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 PRELID3AQ96N28 172 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 AQP10Q96PS8 301 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 C11orf68Q9H3H3 251 aaKnown RBP1.27□□□□□ -2.21
VRK1-202ENST00000553683 NAA60Q9H7X0 242 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 LINC00574Q9H8X3 128 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 TMEM242Q9NWH2 141 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 NDUFB11Q9NX14 153 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 TP73-AS1Q9UF72 201 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 AK3Q9UIJ7 227 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 LINC00527Q9UJ94 153 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 HHLA3Q9XRX5 114 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 LINC00588Q9Y4M8 146 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 VWFP04275 2813 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 GVINP1Q7Z2Y8 2422 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 FN1P02751 2386 aaKnown RBP1.27□□□□□ -2.21
VRK1-202ENST00000553683 PLXND1Q9Y4D7 1925 aa1.27□□□□□ -2.21
VRK1-202ENST00000553683 TRIOO75962 3097 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 FOCADQ5VW36 1801 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 COL24A1Q17RW2 1714 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 NWD2Q9ULI1 1742 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 REREQ9P2R6 1566 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 IGKV1-27A0A075B6S5 117 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 TRAV8-1A0A0A6YYK1 113 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 TRAV1-1A0A0B4J248 108 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 TRBV7-7A0A0K0K1E9 115 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 MUC21A0A140T8X8 626 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 LOC389332A0A1B0GUA5 103 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 GRIFINA4D1Z8 144 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 TMEM235A6NFC5 223 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 ZNF860A6NHJ4 632 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 J3QKU1 62 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 APOC4-APOC2K7ER74 178 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 UPK2O00526 184 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 PSPHP1O15172 72 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 LYRM1O43325 122 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 SYNGR2O43760 224 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 ZNF73O43830 326 aaPredicted RBP1.26□□□□□ -2.21
VRK1-202ENST00000553683 ZNF737O75373 536 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 TCL1BO95988 128 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 IGLV3-27P01718 113 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 TRACP01848 142 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 APOC2P02655 101 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 GYPAP02724 150 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 RBP4P02753 201 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 SFTA3P0C7M3 94 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 HLA-DRB4P13762 266 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 HRES1P13985 223 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 COX7CP15954 63 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 CBLN1P23435 193 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 FUSP35637 526 aaKnown RBP eCLIP1.26□□□□□ -2.21
VRK1-202ENST00000553683 DAPP51397 102 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 TAS2R45P59539 299 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 ADIRFQ15847 76 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 FBXL19-AS1Q494R0 122 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 DEFB134Q4QY38 66 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 C6orf99Q4VX62 202 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 SPATA45Q537H7 98 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 NMSQ5H8A3 153 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 UBE2NLQ5JXB2 153 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 LINC01545Q5VT33 79 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 LAIR2Q6ISS4 152 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 DPPA3Q6W0C5 159 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 Q6ZS49 121 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 LCA10Q71F78 164 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 SPATA12Q7Z6I5 190 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 LINC00596Q86U02 117 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 MARCH3Q86UD3 253 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 BPIFA4PQ86YQ2 179 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 ZNF555Q8NEP9 628 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 OR10P1Q8NGE3 313 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 OR10AG1Q8NH19 301 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 MYOZ3Q8TDC0 251 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 PPDPFLQ8WWR9 84 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 MS4A6EQ96DS6 147 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 KCNS1Q96KK3 526 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 MCEEQ96PE7 176 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 CCL13Q99616 98 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 UPK3BQ9BT76 320 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 COMMD5Q9GZQ3 224 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 DPH3P1Q9H4G8 78 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 RABAC1Q9UI14 185 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 LSM2Q9Y333 95 aaKnown RBP1.26□□□□□ -2.21
VRK1-202ENST00000553683 FIS1Q9Y3D6 152 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 SPCS1Q9Y6A9 102 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 SERP1Q9Y6X1 66 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 HLA-DRB4X5D2U9 266 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 MYH11P35749 1972 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 THSD7AQ9UPZ6 1657 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 ABCA6Q8N139 1617 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 CELSR2Q9HCU4 2923 aa1.26□□□□□ -2.21
VRK1-202ENST00000553683 PLEKHH2Q8IVE3 1493 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 ANKARQ7Z5J8 1434 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 LOXHD1Q8IVV2 1947 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 CHD7Q9P2D1 2997 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 NIPBLQ6KC79 2804 aaeCLIP1.25□□□□□ -2.21
VRK1-202ENST00000553683 TRBV20OR9-2A0A075B6H5 130 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms