RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 ZNF738Q8NE65 137 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 AP5S1Q9NUS5 200 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 C11orf21Q9P2W6 132 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 MUC4Q99102 2169 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 ZFYVE26Q68DK2 2539 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 APCP25054 2843 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 NBPF19A0A087WUL8 3843 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 AGRNO00468 2067 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 KMT2BQ9UMN6 2715 aaPredicted RBP4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 TMSB15BA0A087X1C1 80 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 TRAV2A0A0B4J234 112 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 C20orf202A1L168 122 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 KLLNB2CW77 178 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 K7EQG2 157 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 M0R2Z0 102 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 CD5LO43866 347 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 ZNF705DP0CH99 300 aaPredicted RBP4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 ZNF705BP0CI00 300 aaPredicted RBP4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 PRB4P10163 310 aaPredicted RBP4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 BTF3P20290 206 aaKnown RBP4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 TWIST1Q15672 202 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 LBHQ53QV2 105 aaPredicted RBP4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 EBLN2Q6P2I7 272 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 RNASEKQ6P5S7 137 aaKnown RBP4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 SPATA12Q7Z6I5 190 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 MRPL52Q86TS9 123 aaKnown RBP4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 ORMDL3Q8N138 153 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 WFDC11Q8NEX6 87 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 RNF185Q96GF1 192 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 NDUFAF3Q9BU61 184 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 TMEM160Q9NX00 188 aa4.51□□□□□ -1.69
VIPAS39-204ENST00000553576 LRRK2Q5S007 2527 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 SORL1Q92673 2214 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 EPG5Q9HCE0 2579 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 IGHV4OR15-8A0A075B7B6 117 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 A0A087WW49 117 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 IGHV1-24A0A0C4DH33 117 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 A8MTW9 85 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 D6R8Y8 96 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 TCF21O43680 179 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 HOXD3P31249 432 aaPredicted RBP4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 KRTDAPP60985 99 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 DEFA6Q01524 100 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 PRR9Q5T870 116 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 PET117Q6UWS5 81 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 AMN1Q8IY45 258 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 KLHDC1Q8N7A1 406 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 PRSS3P2Q8NHM4 247 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 C14orf144Q96I85 54 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 PRELID3AQ96N28 172 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 TMEM70Q9BUB7 260 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 MS4A6AQ9H2W1 248 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 PRO1933Q9H354 126 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 SCRT2Q9NQ03 307 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 SIGLEC8Q9NYZ4 499 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 MSRB1Q9NZV6 116 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 HSPB8Q9UJY1 196 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 MAP1AP78559 2803 aaPredicted RBP4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 MXRA5Q9NR99 2828 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 ZANQ9Y493 2812 aa4.5□□□□□ -1.69
VIPAS39-204ENST00000553576 ANK3Q12955 4377 aaKnown RBP4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 A0A0J9YX75 114 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 LINC01619G3V211 115 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 DUSP14O95147 198 aaKnown RBP4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 LEPROTL1O95214 131 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 CKS2P33552 79 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 IFI27P40305 119 aaPredicted RBP4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 SYNJ2BPP57105 145 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 SNRPD3P62318 126 aaKnown RBP4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 RPL11P62913 178 aaKnown RBP4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 TDRG1Q3Y452 100 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 Q6ZSV7 163 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 FA2HQ7L5A8 372 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 SMIM15Q7Z3B0 74 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 POM121L12Q8N7R1 296 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 OR10AG1Q8NH19 301 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 C4orf3Q8WVX3 66 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 MIEN1Q9BRT3 115 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 VAMP8Q9BV40 100 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 TPPP3Q9BW30 176 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 C16orf95Q9H693 158 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 NXT2Q9NPJ8 142 aaKnown RBP4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 PDZD2O15018 2839 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 AKAP9Q99996 3911 aa4.49□□□□□ -1.69
VIPAS39-204ENST00000553576 IGLV2-18A0A075B6J9 118 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 TRAV9-2A0A087WT02 112 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 M0QZ24 198 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 NXPH4O95158 308 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 EDN2P20800 178 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 LEPP41159 167 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 SCGB2A2Q13296 93 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 TCTEX1D4Q5JR98 221 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 LINC01545Q5VT33 79 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 ADAMTSL5Q6ZMM2 481 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 MRAP2Q96G30 205 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 ZNF747Q9BV97 191 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 PEMTQ9UBM1 199 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 PLA2G2DQ9UNK4 145 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms