RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 Q6ZQT7 251 aa9.41□□□□□ -0.9
CACNB3-223ENST00000552480 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
CACNB3-223ENST00000552480 C5orf52A6NGY3 159 aa9.4□□□□□ -0.9
CACNB3-223ENST00000552480 OR11H12B2RN74 326 aa9.4□□□□□ -0.9
CACNB3-223ENST00000552480 F2Z2F3 143 aa9.4□□□□□ -0.9
CACNB3-223ENST00000552480 APCSP02743 223 aa9.4□□□□□ -0.9
CACNB3-223ENST00000552480 NDUFA6P56556 154 aa9.4□□□□□ -0.9
CACNB3-223ENST00000552480 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
CACNB3-223ENST00000552480 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
CACNB3-223ENST00000552480 M0R2Z0 102 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 SNRPEP62304 92 aaKnown RBP9.39□□□□□ -0.91
CACNB3-223ENST00000552480 ZNF124Q15973 351 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 SPINK13Q1W4C9 94 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 ANXA2RQ3ZCQ2 193 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 GFI1BQ5VTD9 330 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 FAM110AQ9BQ89 295 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 CNFNQ9BYD5 112 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 F8P00451 2351 aa9.39□□□□□ -0.91
CACNB3-223ENST00000552480 TRAV12-3A0A0B4J271 114 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 RBMY1BA6NDE4 496 aaKnown RBP9.38□□□□□ -0.91
CACNB3-223ENST00000552480 RBMY1EA6NEQ0 496 aaKnown RBP9.38□□□□□ -0.91
CACNB3-223ENST00000552480 SNAI2O43623 268 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 ZNF324O75467 553 aaPredicted RBP9.38□□□□□ -0.91
CACNB3-223ENST00000552480 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 RBMY1DP0C7P1 496 aaKnown RBP9.38□□□□□ -0.91
CACNB3-223ENST00000552480 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 ASIPP42127 132 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 INSL3P51460 131 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 SLAQ13239 276 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 DNLZQ5SXM8 178 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 C9orf66Q5T8R8 295 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 KCNS1Q96KK3 526 aa9.38□□□□□ -0.91
CACNB3-223ENST00000552480 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
CACNB3-223ENST00000552480 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
CACNB3-223ENST00000552480 UBE2CO00762 179 aa9.37□□□□□ -0.91
CACNB3-223ENST00000552480 MUC21Q5SSG8 566 aa9.37□□□□□ -0.91
CACNB3-223ENST00000552480 FAM159AQ6UWV7 190 aa9.37□□□□□ -0.91
CACNB3-223ENST00000552480 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
CACNB3-223ENST00000552480 ZNF747Q9BV97 191 aa9.37□□□□□ -0.91
CACNB3-223ENST00000552480 NF1P21359 2839 aa9.37□□□□□ -0.91
CACNB3-223ENST00000552480 CACNG7P62955 275 aa9.36□□□□□ -0.91
CACNB3-223ENST00000552480 KIAA1644Q3SXP7 199 aa9.36□□□□□ -0.91
CACNB3-223ENST00000552480 TDRG1Q3Y452 100 aa9.36□□□□□ -0.91
CACNB3-223ENST00000552480 COA6Q5JTJ3 125 aaKnown RBP9.36□□□□□ -0.91
CACNB3-223ENST00000552480 PRIMA1Q86XR5 153 aa9.36□□□□□ -0.91
CACNB3-223ENST00000552480 STHQ8IWL8 128 aa9.36□□□□□ -0.91
CACNB3-223ENST00000552480 IGHV4-4A0A075B6R2 117 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 H3BVH4 76 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 CRXO43186 299 aaPredicted RBP9.35□□□□□ -0.91
CACNB3-223ENST00000552480 AMBPP02760 352 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 HOXA5P20719 270 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 NTF3P20783 257 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
CACNB3-223ENST00000552480 SRIP30626 198 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 FXYD7P58549 80 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 TWIST1Q15672 202 aa9.35□□□□□ -0.91
CACNB3-223ENST00000552480 TRPT1Q86TN4 253 aaKnown RBP9.35□□□□□ -0.91
CACNB3-223ENST00000552480 MCRIP2Q9BUT9 160 aaKnown RBP9.35□□□□□ -0.91
CACNB3-223ENST00000552480 C2CD3Q4AC94 2353 aa9.34□□□□□ -0.91
CACNB3-223ENST00000552480 IGHV1OR15-1A0A075B7D0 117 aa9.34□□□□□ -0.91
CACNB3-223ENST00000552480 LOC102724200A0A096LPH7 203 aaPredicted RBP9.34□□□□□ -0.91
CACNB3-223ENST00000552480 GNRH2O43555 120 aa9.34□□□□□ -0.91
CACNB3-223ENST00000552480 CD7P09564 240 aa9.34□□□□□ -0.91
CACNB3-223ENST00000552480 Q0VG73 95 aa9.34□□□□□ -0.91
CACNB3-223ENST00000552480 OR10AG1Q8NH19 301 aa9.34□□□□□ -0.91
CACNB3-223ENST00000552480 SCRT2Q9NQ03 307 aa9.34□□□□□ -0.91
CACNB3-223ENST00000552480 C19orf73Q9NVV2 129 aa9.34□□□□□ -0.91
CACNB3-223ENST00000552480 INSP01308 110 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 RNASE3P12724 160 aaKnown RBP9.33□□□□□ -0.92
CACNB3-223ENST00000552480 SSTP61278 116 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 OR10J3Q5JRS4 329 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 FAM104BQ5XKR9 115 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 WFDC9Q8NEX5 89 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 C20orf144Q9BQM9 153 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
CACNB3-223ENST00000552480 TMEM191AQ9H0A3 160 aa9.33□□□□□ -0.92
CACNB3-223ENST00000552480 TRGV11A0A075B6L2 103 aa9.32□□□□□ -0.92
CACNB3-223ENST00000552480 RBMY1A1P0DJD3 496 aaKnown RBP9.32□□□□□ -0.92
CACNB3-223ENST00000552480 RBMY1CP0DJD4 496 aa9.32□□□□□ -0.92
CACNB3-223ENST00000552480 RBMY1FQ15415 496 aaKnown RBP9.32□□□□□ -0.92
CACNB3-223ENST00000552480 PRR31Q5SQ13 230 aa9.32□□□□□ -0.92
CACNB3-223ENST00000552480 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
CACNB3-223ENST00000552480 SHISA2Q6UWI4 295 aa9.32□□□□□ -0.92
CACNB3-223ENST00000552480 HIST3H2BBQ8N257 126 aa9.32□□□□□ -0.92
CACNB3-223ENST00000552480 LINC00467Q9BRT7 94 aa9.32□□□□□ -0.92
CACNB3-223ENST00000552480 MSRB1Q9NZV6 116 aa9.32□□□□□ -0.92
CACNB3-223ENST00000552480 TIMM8BQ9Y5J9 83 aaPredicted RBP9.32□□□□□ -0.92
CACNB3-223ENST00000552480 IGHV3-16A0A0C4DH30 117 aa9.31□□□□□ -0.92
CACNB3-223ENST00000552480 NXPH4O95158 308 aa9.31□□□□□ -0.92
CACNB3-223ENST00000552480 NUTF2P61970 127 aaKnown RBP9.31□□□□□ -0.92
CACNB3-223ENST00000552480 C12orf54Q6X4T0 127 aa9.31□□□□□ -0.92
CACNB3-223ENST00000552480 SMIM15Q7Z3B0 74 aa9.31□□□□□ -0.92
CACNB3-223ENST00000552480 C3orf56Q8N813 242 aa9.31□□□□□ -0.92
CACNB3-223ENST00000552480 TMEM158Q8WZ71 300 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms