RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 UBE2D1P51668 147 aa9.42□□□□□ -0.9
ERBB3-219ENST00000551242 C3orf36Q3SXR2 165 aa9.42□□□□□ -0.9
ERBB3-219ENST00000551242 ONECUT1Q9UBC0 465 aa9.42□□□□□ -0.9
ERBB3-219ENST00000551242 IGHV3-66A0A0C4DH42 116 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 LINC01619G3V211 115 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 NUP37Q8NFH4 326 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 ASH1LQ9NR48 2969 aaKnown RBP9.41□□□□□ -0.9
ERBB3-219ENST00000551242 MED13LQ71F56 2210 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 IGHV3OR16-13A0A075B7E8 117 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 IGHV3-74A0A0B4J1X5 117 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 UBE2D3P61077 147 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 UBE2D2P62837 147 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 BSPH1Q075Z2 132 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 ABCA4P78363 2273 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 A6NJY4 79 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 LYNX1G3V0Z9 82 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 LYNX1P0DP58 116 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 SRSF2Q01130 221 aaKnown RBP9.41□□□□□ -0.9
ERBB3-219ENST00000551242 SPANXN1Q5VSR9 72 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 ASCL5Q7RTU5 278 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 ANKRD29Q8N6D5 301 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
ERBB3-219ENST00000551242 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
ERBB3-219ENST00000551242 CD7P09564 240 aa9.4□□□□□ -0.9
ERBB3-219ENST00000551242 EMP1P54849 157 aa9.4□□□□□ -0.9
ERBB3-219ENST00000551242 ZFAND6Q6FIF0 208 aa9.4□□□□□ -0.9
ERBB3-219ENST00000551242 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
ERBB3-219ENST00000551242 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.9
ERBB3-219ENST00000551242 LRBAP50851 2863 aa9.4□□□□□ -0.9
ERBB3-219ENST00000551242 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.91
ERBB3-219ENST00000551242 ZNF688P0C7X2 276 aa9.4□□□□□ -0.91
ERBB3-219ENST00000551242 ZNF672Q499Z4 452 aaPredicted RBP9.4□□□□□ -0.91
ERBB3-219ENST00000551242 RASL10AQ92737 203 aa9.4□□□□□ -0.91
ERBB3-219ENST00000551242 SMIM2Q9BVW6 85 aa9.4□□□□□ -0.91
ERBB3-219ENST00000551242 DCHS2Q6V1P9 2916 aa9.4□□□□□ -0.91
ERBB3-219ENST00000551242 IGLV11-55A0A075B6I3 123 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 GAGE5Q13069 117 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 GAGE6Q13070 117 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 TEX29Q8N6K0 151 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 SPTA1P02549 2419 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 A8MWV9 139 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 NBR2O15453 112 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 CTSGP08311 255 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 NHLRC4P0CG21 123 aaPredicted RBP9.39□□□□□ -0.91
ERBB3-219ENST00000551242 HES1Q14469 280 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 NDUFA11Q86Y39 141 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 KAAG1Q9UBP8 84 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 NBASA2RRP1 2371 aa9.39□□□□□ -0.91
ERBB3-219ENST00000551242 PRTN3P24158 256 aa9.38□□□□□ -0.91
ERBB3-219ENST00000551242 DEFB109BQ30KR1 87 aa9.38□□□□□ -0.91
ERBB3-219ENST00000551242 IGFL2Q6UWQ7 119 aa9.38□□□□□ -0.91
ERBB3-219ENST00000551242 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
ERBB3-219ENST00000551242 RPL39LQ96EH5 51 aaKnown RBP9.38□□□□□ -0.91
ERBB3-219ENST00000551242 NDPQ00604 133 aa9.38□□□□□ -0.91
ERBB3-219ENST00000551242 RNASE6Q93091 150 aaKnown RBP9.38□□□□□ -0.91
ERBB3-219ENST00000551242 DYNLRB1Q9NP97 96 aa9.38□□□□□ -0.91
ERBB3-219ENST00000551242 TRBV20-1A0A075B6N2 111 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 COX6B1P14854 86 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 TOMM6Q96B49 74 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 IGHV3-49A0A0A0MS15 119 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 J3KRW8 73 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 Q6ZS46 218 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 OR11H6Q8NGC7 330 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 AJUBAQ96IF1 538 aa9.37□□□□□ -0.91
ERBB3-219ENST00000551242 C2orf66Q6UXQ4 117 aa9.36□□□□□ -0.91
ERBB3-219ENST00000551242 MSRB2Q9Y3D2 182 aa9.36□□□□□ -0.91
ERBB3-219ENST00000551242 LY6LH3BQJ8 138 aa9.36□□□□□ -0.91
ERBB3-219ENST00000551242 M0R381 172 aa9.36□□□□□ -0.91
ERBB3-219ENST00000551242 CFC1BP0CG36 223 aa9.36□□□□□ -0.91
ERBB3-219ENST00000551242 CFC1P0CG37 223 aa9.36□□□□□ -0.91
ERBB3-219ENST00000551242 CRIP2P52943 208 aaPredicted RBP9.36□□□□□ -0.91
ERBB3-219ENST00000551242 BSNQ9UPA5 3926 aa9.36□□□□□ -0.91
ERBB3-219ENST00000551242 SUMO2P61956 95 aaKnown RBP9.35□□□□□ -0.91
ERBB3-219ENST00000551242 CITED1Q99966 193 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 CRLF1O75462 422 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 ORMDL2Q53FV1 153 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 RAX2Q96IS3 184 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 RNF5Q99942 180 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 A0A0J9YY99 117 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.35□□□□□ -0.91
ERBB3-219ENST00000551242 TRPT1Q86TN4 253 aaKnown RBP9.35□□□□□ -0.91
ERBB3-219ENST00000551242 ZFHX3Q15911 3703 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 SPTBN4Q9H254 2564 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 C9JAW5 83 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 LYRM7Q5U5X0 104 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 CCDC179H3BU77 68 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 H7C2G1 150 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 IGF1P05019 195 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 C14orf178Q8N769 122 aaPredicted RBP9.34□□□□□ -0.91
ERBB3-219ENST00000551242 HIF1ANQ9NWT6 349 aa9.34□□□□□ -0.91
ERBB3-219ENST00000551242 SLC25A20O43772 301 aa9.33□□□□□ -0.92
ERBB3-219ENST00000551242 DUSP14O95147 198 aaKnown RBP9.33□□□□□ -0.92
ERBB3-219ENST00000551242 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms