RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SLC30A7Q8NEW0 376 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 OR13C8Q8NGS7 320 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 OR13C6PQ8NH95 151 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 ARL11Q969Q4 196 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 MALSU1Q96EH3 234 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 SLC25A44Q96H78 314 aaPredicted RBP2.28□□□□□ -2.04
LIMA1-205ENST00000550592 TSSK6Q9BXA6 273 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 OR2J1Q9GZK6 312 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 OR51E2Q9H255 320 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 FBXL15Q9H469 300 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 NAT8Q9UHE5 227 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 TPRKBQ9Y3C4 175 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 VPS13DQ5THJ4 4388 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 TRBV24-1A0A075B6N3 115 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 hCG_1818297A0A087WSY0 165 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 A0A087WUJ7 227 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 MEIKINA0A087WXM9 373 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 EXOC1LA0A1B0GW35 172 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 A6NED7 52 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 PRORSD1PA6NEY8 169 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 CLDN24A6NM45 220 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 INMT-MINDY4F8WBC2 141 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 STK16O75716 305 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 ORM1P02763 201 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 TYMSP04818 313 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 NMBP08949 121 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 UBBP0CG47 229 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 ESDP10768 282 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 TCL1AP56279 114 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 MP68P56378 58 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 TAS2R30P59541 319 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 S100A10P60903 97 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 GNG3P63215 75 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 MLLT11Q13015 90 aaPredicted RBP2.27□□□□□ -2.05
LIMA1-205ENST00000550592 C1orf194Q5T5A4 169 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 TMEM244Q5VVB8 128 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 NOXRED1Q6NXP6 359 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 HIST2H3AQ71DI3 136 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 DEFB107AQ8IZN7 70 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 SMIM20Q8N5G0 67 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 OR5A2Q8NGI9 324 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 OR9I1Q8NGQ6 314 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 OR4A5Q8NH83 315 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 RPS4Y2Q8TD47 263 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 RNASEH2CQ8TDP1 164 aaKnown RBP2.27□□□□□ -2.05
LIMA1-205ENST00000550592 CANT1Q8WVQ1 401 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 OR5P3Q8WZ94 311 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 SLC35G5Q96KT7 338 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 MIEN1Q9BRT3 115 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 PSMG3Q9BT73 122 aaPredicted RBP2.27□□□□□ -2.05
LIMA1-205ENST00000550592 PECRQ9BY49 303 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 SEC11CQ9BY50 192 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 ARL6Q9H0F7 186 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 TAF9BQ9HBM6 251 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 SPANXB1Q9NS25 103 aaPredicted RBP2.27□□□□□ -2.05
LIMA1-205ENST00000550592 BET1LQ9NYM9 111 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 COMMD9Q9P000 198 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 OPTCQ9UBM4 332 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 SS18L2Q9UHA2 77 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 HSPB8Q9UJY1 196 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 JPT1Q9UK76 154 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 TRAPPC2LQ9UL33 140 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 FAT2Q9NYQ8 4349 aa2.27□□□□□ -2.05
LIMA1-205ENST00000550592 IGLV10-54A0A075B6I4 117 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 M0R2Z0 102 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 DEGS1O15121 323 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 DBIP07108 87 aaKnown RBP2.26□□□□□ -2.05
LIMA1-205ENST00000550592 SMIM17P0DL12 118 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 ATF1P18846 271 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 NFYAP23511 347 aaPredicted RBP2.26□□□□□ -2.05
LIMA1-205ENST00000550592 OR10J1P30954 320 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 GABRA2P47869 451 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 PRB3Q04118 309 aaPredicted RBP2.26□□□□□ -2.05
LIMA1-205ENST00000550592 KLRD1Q13241 179 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 BATFQ16520 125 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 IAH1Q2TAA2 248 aaPredicted RBP2.26□□□□□ -2.05
LIMA1-205ENST00000550592 SPIN4Q56A73 249 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 C10orf91Q5T1B1 145 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 C1orf134Q5TEV5 83 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 TMEM42Q69YG0 159 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 OR8I2Q8N0Y5 310 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 OR4D11Q8NGI4 311 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 Q8WTZ3 238 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 HIST1H2BAQ96A08 127 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 CCDC115Q96NT0 180 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 GPER1Q99527 375 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 MRPL57Q9BQC6 102 aaKnown RBP2.26□□□□□ -2.05
LIMA1-205ENST00000550592 TMEM126AQ9H061 195 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 TLNRD1Q9H1K6 362 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 ENY2Q9NPA8 101 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 ACER3Q9NUN7 267 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 LINC00588Q9Y4M8 146 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 DNAH2Q9P225 4427 aa2.26□□□□□ -2.05
LIMA1-205ENST00000550592 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 FSIP2Q5CZC0 6907 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 IGHV3OR15-7A0A075B7D8 119 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 BORCS7-ASMTA0A0B4J1R7 106 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 TMEM189A5PLL7 270 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 MAP1LC3B2A6NCE7 125 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 SMIM9A6NGZ8 99 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms