RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 DUX5Q96PT3 197 aa8□□□□□ -1.13
SMARCC2-209ENST00000550164 CEP295Q9C0D2 2601 aa8□□□□□ -1.13
SMARCC2-209ENST00000550164 SHISA9B4DS77 424 aa8□□□□□ -1.13
SMARCC2-209ENST00000550164 IGLV1-47P01700 117 aa8□□□□□ -1.13
SMARCC2-209ENST00000550164 CD28P10747 220 aa8□□□□□ -1.13
SMARCC2-209ENST00000550164 WFDC2Q14508 124 aa8□□□□□ -1.13
SMARCC2-209ENST00000550164 FAM110DQ8TAY7 271 aaPredicted RBP8□□□□□ -1.13
SMARCC2-209ENST00000550164 MOB4Q9Y3A3 225 aa8□□□□□ -1.13
SMARCC2-209ENST00000550164 IGHV3-73A0A0B4J1V6 119 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 TMEM262E9PQX1 116 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 ZNF876PQ49A33 203 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 IGF2RP11717 2491 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 A0A087WX48 190 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 C9JAW5 83 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 PRAC2D3DTV9 90 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 C19orf54Q5BKX5 351 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 DUX3Q96PT4 197 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 RHPN1-AS1Q9BWJ2 59 aa7.99□□□□□ -1.13
SMARCC2-209ENST00000550164 HLA-DRB4P13762 266 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 ANXA2RQ3ZCQ2 193 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 HLA-DRB4X5D2U9 266 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 OVOL3O00110 214 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 GAGE2BQ13066 116 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 GAGE2EQ4V326 116 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 C1orf122Q6ZSJ8 110 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 LINC00574Q9H8X3 128 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 GAGE2DQ9UEU5 116 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 MYO9AB2RTY4 2548 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 IGLL5B9A064 214 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 GRNP28799 593 aaKnown RBP7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 BPESC1Q9GZL8 116 aa7.98□□□□□ -1.13
SMARCC2-209ENST00000550164 H3BUX3 64 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 CTSGP08311 255 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 ZFAND6Q6FIF0 208 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 CFAP54Q96N23 3096 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 IGLV11-55A0A075B6I3 123 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 TSPAN13O95857 204 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 MYCNOSP40205 109 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 PRSS29PA6NIE9 313 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 RRN3P1Q2M238 152 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 RUSC1-AS1Q66K80 236 aa7.97□□□□□ -1.13
SMARCC2-209ENST00000550164 F6UB75 175 aa7.96□□□□□ -1.13
SMARCC2-209ENST00000550164 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.13
SMARCC2-209ENST00000550164 ODF1Q14990 250 aa7.96□□□□□ -1.13
SMARCC2-209ENST00000550164 TAL2Q16559 108 aa7.96□□□□□ -1.13
SMARCC2-209ENST00000550164 SPXQ9BT56 116 aa7.96□□□□□ -1.13
SMARCC2-209ENST00000550164 TET2Q6N021 2002 aaPredicted RBP7.96□□□□□ -1.14
SMARCC2-209ENST00000550164 FOXI2Q6ZQN5 318 aa7.96□□□□□ -1.14
SMARCC2-209ENST00000550164 CCL19Q99731 98 aa7.96□□□□□ -1.14
SMARCC2-209ENST00000550164 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 WI2-2373I1.2A0A1W2PRP0 233 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 SDHAF1A6NFY7 115 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 G3V4G9 280 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 RPL39LQ96EH5 51 aaKnown RBP7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 URB1-AS1Q96HZ7 61 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 UBE2L6O14933 153 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 CRIP1P50238 77 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 PMVKQ15126 192 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 TMEM95Q3KNT9 176 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 ZNF493Q6ZR52 646 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 PIP4P1Q86T03 277 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 ITLN2Q8WWU7 325 aaPredicted RBP7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 PRUNE2Q8WUY3 3088 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 GNRH2O43555 120 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 UBE2E1P51965 193 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 KLHL30-AS1Q8NEE0 82 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 ATP6V0BQ99437 205 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 LINC01587Q99440 93 aa7.95□□□□□ -1.14
SMARCC2-209ENST00000550164 IGHV7-81A0A0B4J1V7 117 aa7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 C10orf126Q8N4M7 172 aa7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 PPDPFLQ8WWR9 84 aa7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 FANCD2OSQ96PS1 177 aa7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 TOMM7Q9P0U1 55 aa7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 M0R2P5 195 aa7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 BUB3O43684 328 aa7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
SMARCC2-209ENST00000550164 C2orf82Q6UX34 121 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 C2orf91Q6ZV80 131 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 OR11H6Q8NGC7 330 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 TRBV6-1A0A0K0K1D8 114 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 DNAL4O96015 105 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 LY6DQ14210 128 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 HIGD1BQ9P298 99 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 TRIOO75962 3097 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 FAM223BA6NKX1 122 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 IGLV2-11P01706 119 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 FAM223AQ8IWN6 122 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 DAZ1Q9NQZ3 744 aaKnown RBP7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 TRAV12-2A0A075B6T6 113 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 IGKV2D-26A0A0A0MRZ7 120 aa7.93□□□□□ -1.14
SMARCC2-209ENST00000550164 TRBV20-1A0A075B6N2 111 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 DUSP14O95147 198 aaKnown RBP7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 DEFB1P60022 68 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 NPBQ8NG41 125 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 OR13C6PQ8NH95 151 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 PRO1854Q9UHT4 67 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 CDH23Q9H251 3354 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 KNCNA6PVL3 124 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 FGF6P10767 208 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms