RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 NCR3O14931 201 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 NCR2O95944 276 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 IGHV3-30P01768 117 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 GYPBP06028 91 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 LINC00694P0DN24 101 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 IGHV3-30-5P0DP03 117 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 ADCYAP1P18509 176 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 PDE6GP18545 87 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 RHOHQ15669 191 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 OCIAD2Q56VL3 154 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 TSC22D3Q99576 134 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 MUC4Q99102 2169 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 SYNJ1O43426 1573 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 TMEM30CPA0ZSE6 113 aa1.28□□□□□ -2.2
SNRPF-202ENST00000549580 KRTAP10-4P60372 401 aaPredicted RBP1.28□□□□□ -2.2
SNRPF-202ENST00000549580 TAS2R8Q9NYW2 309 aa1.28□□□□□ -2.2
SNRPF-202ENST00000549580 CCDC171Q6TFL3 1326 aa1.28□□□□□ -2.2
SNRPF-202ENST00000549580 CPDO75976 1380 aa1.28□□□□□ -2.2
SNRPF-202ENST00000549580 ZCCHC6Q5VYS8 1495 aaKnown RBP1.28□□□□□ -2.2
SNRPF-202ENST00000549580 ANK1P16157 1881 aa1.28□□□□□ -2.2
SNRPF-202ENST00000549580 PEAK1Q9H792 1746 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 E9PCH4 1651 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 TRBV20-1A0A075B6N2 111 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 FAM236AA0A1B0GUQ0 79 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 FAM236BA0A1B0GV22 79 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 FXYD4P59646 89 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 CSAG1Q6PB30 78 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 ATP11AUNQ6ZP68 121 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 SNX29P2Q8IUI4 249 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 ATP6V0E2Q8NHE4 81 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 VPS25Q9BRG1 176 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 SAR1AQ9NR31 198 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 LSM2Q9Y333 95 aaKnown RBP1.27□□□□□ -2.21
SNRPF-202ENST00000549580 NOP16Q9Y3C1 178 aaKnown RBP1.27□□□□□ -2.21
SNRPF-202ENST00000549580 DLG5Q8TDM6 1919 aa1.27□□□□□ -2.21
SNRPF-202ENST00000549580 WDR97A6NE52 1622 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 UHRF1BP1LA0JNW5 1464 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 PRG4Q92954 1404 aaPredicted RBP1.26□□□□□ -2.21
SNRPF-202ENST00000549580 A0A0G2JMM0 328 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 M0R2P5 195 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 NDUFA2O43678 99 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 TPST1O60507 370 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 IGF2P01344 180 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 IL7P13232 177 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 POLR2JP52435 117 aaKnown RBP1.26□□□□□ -2.21
SNRPF-202ENST00000549580 RPL37AP61513 92 aaKnown RBP1.26□□□□□ -2.21
SNRPF-202ENST00000549580 COPZ1P61923 177 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 RPS25P62851 125 aaKnown RBP1.26□□□□□ -2.21
SNRPF-202ENST00000549580 UNQ5815/PRO19632Q6UWF5 114 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 SLC25A26Q70HW3 274 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 SBSPONQ8IVN8 264 aa1.26□□□□□ -2.21
SNRPF-202ENST00000549580 MRPL36Q9P0J6 103 aaKnown RBP1.26□□□□□ -2.21
SNRPF-202ENST00000549580 HELZP42694 1942 aaKnown RBP1.26□□□□□ -2.21
SNRPF-202ENST00000549580 PHRF1Q9P1Y6 1649 aaKnown RBP1.26□□□□□ -2.21
SNRPF-202ENST00000549580 NCOA6Q14686 2063 aaPredicted RBP1.25□□□□□ -2.21
SNRPF-202ENST00000549580 PTPRGP23470 1445 aa1.25□□□□□ -2.21
SNRPF-202ENST00000549580 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.25□□□□□ -2.21
SNRPF-202ENST00000549580 TRAV2A0A0B4J234 112 aa1.25□□□□□ -2.21
SNRPF-202ENST00000549580 NUPR2A6NF83 97 aa1.25□□□□□ -2.21
SNRPF-202ENST00000549580 J3QLW9 94 aa1.25□□□□□ -2.21
SNRPF-202ENST00000549580 NPFFO15130 113 aa1.25□□□□□ -2.21
SNRPF-202ENST00000549580 LYPD5Q6UWN5 251 aa1.25□□□□□ -2.21
SNRPF-202ENST00000549580 ATOH7Q8N100 152 aa1.25□□□□□ -2.21
SNRPF-202ENST00000549580 KIDINS220Q9ULH0 1771 aa1.25□□□□□ -2.21
SNRPF-202ENST00000549580 FLG2Q5D862 2391 aaPredicted RBP1.25□□□□□ -2.21
SNRPF-202ENST00000549580 TRPM7Q96QT4 1865 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 TRAV17A0A0B4J275 112 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 IGKCP01834 107 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 EFNA4P52798 201 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 DYNLRB2Q8TF09 96 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 PPDPFLQ8WWR9 84 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 DMAC1Q96GE9 116 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 ATG5Q9H1Y0 275 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 ERG28Q9UKR5 140 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 NINQ8N4C6 2090 aa1.24□□□□□ -2.21
SNRPF-202ENST00000549580 ZNF670-ZNF695F2Z2N8 137 aa1.23□□□□□ -2.21
SNRPF-202ENST00000549580 LINC00575Q6W349 94 aa1.23□□□□□ -2.21
SNRPF-202ENST00000549580 MRPL35Q9NZE8 188 aaKnown RBP1.23□□□□□ -2.21
SNRPF-202ENST00000549580 TET1Q8NFU7 2136 aa1.22□□□□□ -2.21
SNRPF-202ENST00000549580 HIGD1CA8MV81 97 aa1.22□□□□□ -2.21
SNRPF-202ENST00000549580 M0R129 80 aa1.22□□□□□ -2.21
SNRPF-202ENST00000549580 IQCJQ1A5X6 159 aa1.22□□□□□ -2.21
SNRPF-202ENST00000549580 Q6ZQY7 126 aa1.22□□□□□ -2.21
SNRPF-202ENST00000549580 SNRNP200O75643 2136 aaKnown RBP1.22□□□□□ -2.21
SNRPF-202ENST00000549580 BICRAQ9NZM4 1560 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 EML5Q05BV3 1969 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 ERCC6Q03468 1493 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 SELENOWP63302 87 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 SCIMPQ6UWF3 145 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 PSMG3Q9BT73 122 aaPredicted RBP1.21□□□□□ -2.22
SNRPF-202ENST00000549580 TMEM191AQ9H0A3 160 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 LRP5O75197 1615 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 ZGRF1Q86YA3 2104 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 MYH13Q9UKX3 1938 aa1.21□□□□□ -2.22
SNRPF-202ENST00000549580 TRBV10-1A0A0K0K1A3 114 aa1.2□□□□□ -2.22
SNRPF-202ENST00000549580 EFCAB10A6NFE3 127 aa1.2□□□□□ -2.22
SNRPF-202ENST00000549580 PYYP10082 97 aa1.2□□□□□ -2.22
SNRPF-202ENST00000549580 GUCA1AP43080 201 aaPredicted RBP1.2□□□□□ -2.22
SNRPF-202ENST00000549580 RRAS2P62070 204 aaPredicted RBP1.2□□□□□ -2.22
SNRPF-202ENST00000549580 XAF1Q6GPH4 301 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms