RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TEX48A0A1B0GUV7 120 aa10.78□□□□□ -0.68
RAPGEF3-218ENST00000548919 M0R381 172 aa10.78□□□□□ -0.68
RAPGEF3-218ENST00000548919 C9orf47Q6ZRZ4 202 aa10.78□□□□□ -0.68
RAPGEF3-218ENST00000548919 TM2D2Q9BX73 214 aa10.78□□□□□ -0.68
RAPGEF3-218ENST00000548919 TMEM238LA0A1B0GVL6 79 aa10.78□□□□□ -0.68
RAPGEF3-218ENST00000548919 SRSF1Q07955 248 aaKnown RBP eCLIP10.78□□□□□ -0.68
RAPGEF3-218ENST00000548919 IGHV3OR16-10A0A075B7F0 116 aa10.77□□□□□ -0.68
RAPGEF3-218ENST00000548919 UBE2E1P51965 193 aa10.77□□□□□ -0.68
RAPGEF3-218ENST00000548919 SPTAN1Q13813 2472 aaKnown RBP10.77□□□□□ -0.69
RAPGEF3-218ENST00000548919 CRYBG3Q68DQ2 2970 aa10.77□□□□□ -0.69
RAPGEF3-218ENST00000548919 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.69
RAPGEF3-218ENST00000548919 PSMG4Q5JS54 123 aa10.77□□□□□ -0.69
RAPGEF3-218ENST00000548919 RPL39LQ96EH5 51 aaKnown RBP10.77□□□□□ -0.69
RAPGEF3-218ENST00000548919 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
RAPGEF3-218ENST00000548919 HIST1H4GQ99525 98 aa10.76□□□□□ -0.69
RAPGEF3-218ENST00000548919 SMIM2Q9BVW6 85 aa10.76□□□□□ -0.69
RAPGEF3-218ENST00000548919 TRBV7-1A0A0A6YYK4 115 aa10.76□□□□□ -0.69
RAPGEF3-218ENST00000548919 IGLL5B9A064 214 aa10.76□□□□□ -0.69
RAPGEF3-218ENST00000548919 TRBV12-3P01733 135 aa10.76□□□□□ -0.69
RAPGEF3-218ENST00000548919 ATP5G2Q06055 141 aa10.76□□□□□ -0.69
RAPGEF3-218ENST00000548919 MTURNQ8N3F0 131 aa10.76□□□□□ -0.69
RAPGEF3-218ENST00000548919 HIVEP3Q5T1R4 2406 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 IGHV4-4A0A075B6R2 117 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 AMTNQ6UX39 209 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 LCNL1Q6ZST4 164 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 C14orf178Q8N769 122 aaPredicted RBP10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 DEFB104AQ8WTQ1 72 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 U3KQE9 123 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 PLNP26678 52 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 WFDC2Q14508 124 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 C12orf74Q32Q52 190 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 C5orf56Q8N8D9 126 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 HIF1ANQ9NWT6 349 aa10.75□□□□□ -0.69
RAPGEF3-218ENST00000548919 TMEM238C9JI98 176 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 E9PLD3 99 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 H3BMG7 143 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 RASL10AQ92737 203 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 MRPL53Q96EL3 112 aaKnown RBP10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 ZNF479Q96JC4 524 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 UBTD1Q9HAC8 227 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 CELSR2Q9HCU4 2923 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 IGKV3-7A0A075B6H7 116 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 NBL1P41271 181 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 KLK9Q2XQG4 91 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 KLK9Q9UKQ9 250 aa10.74□□□□□ -0.69
RAPGEF3-218ENST00000548919 F6UB75 175 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 F8VRH5 84 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 H7C1H1 209 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 HLA-DRB4P13762 266 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 GPHB5Q86YW7 130 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 BPESC1Q9GZL8 116 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 CHTOPQ9Y3Y2 248 aaKnown RBP10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 HLA-DRB4X5D2U9 266 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 NPFFO15130 113 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 MGPP08493 103 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 S100A4P26447 101 aaKnown RBP10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 SUMO2P61956 95 aaKnown RBP10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 ZFAND2AQ8N6M9 145 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 MRAP2Q96G30 205 aa10.73□□□□□ -0.69
RAPGEF3-218ENST00000548919 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
RAPGEF3-218ENST00000548919 ITLN2Q8WWU7 325 aaPredicted RBP10.72□□□□□ -0.69
RAPGEF3-218ENST00000548919 TRAV41A0A0B4J266 112 aa10.72□□□□□ -0.69
RAPGEF3-218ENST00000548919 ARL3P36405 182 aa10.72□□□□□ -0.69
RAPGEF3-218ENST00000548919 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
RAPGEF3-218ENST00000548919 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
RAPGEF3-218ENST00000548919 GNRH2O43555 120 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 RNASE4P34096 147 aaKnown RBP10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 LMO4P61968 165 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 ANXA2RQ3ZCQ2 193 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 ABCA2Q9BZC7 2435 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 OR11H12B2RN74 326 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 OR11H1Q8NG94 326 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 OR11H2Q8NH07 326 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 TOMM6Q96B49 74 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 PHLDA3Q9Y5J5 127 aa10.71□□□□□ -0.69
RAPGEF3-218ENST00000548919 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.7
RAPGEF3-218ENST00000548919 MYMXA0A1B0GTQ4 84 aa10.71□□□□□ -0.7
RAPGEF3-218ENST00000548919 IGHV3-11P01762 117 aa10.71□□□□□ -0.7
RAPGEF3-218ENST00000548919 BRD3OSQ6XYD6 125 aa10.71□□□□□ -0.7
RAPGEF3-218ENST00000548919 C9orf139Q6ZV77 190 aa10.71□□□□□ -0.7
RAPGEF3-218ENST00000548919 NEXN-AS1Q8NBZ9 246 aa10.71□□□□□ -0.7
RAPGEF3-218ENST00000548919 TRAV12-1A0A0B4J245 112 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 RNF223E7ERA6 249 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 OR10J6PQ8NGY7 276 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 RAXQ9Y2V3 346 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 TAL2Q16559 108 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 ORMDL2Q53FV1 153 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 C2orf66Q6UXQ4 117 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 BAALCQ8WXS3 180 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 DPH3P1Q9H4G8 78 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 SPANXB1Q9NS25 103 aaPredicted RBP10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 MUC4Q99102 2169 aa10.7□□□□□ -0.7
RAPGEF3-218ENST00000548919 ASIPP42127 132 aa10.69□□□□□ -0.7
RAPGEF3-218ENST00000548919 GTSF1LQ9H1H1 148 aa10.69□□□□□ -0.7
RAPGEF3-218ENST00000548919 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms