RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 SHISA9B4DS77 424 aa11.76□□□□□ -0.53
BRF1-211ENST00000547530 Q6ZS92 163 aa11.76□□□□□ -0.53
BRF1-211ENST00000547530 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
BRF1-211ENST00000547530 SMAD5-AS1Q9Y6J3 95 aa11.76□□□□□ -0.53
BRF1-211ENST00000547530 MYO18BQ8IUG5 2567 aa11.76□□□□□ -0.53
BRF1-211ENST00000547530 CTSGP08311 255 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 SLC25A16P16260 332 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 CEACAM3P40198 252 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 LAGE3Q14657 143 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 ZFP2Q6ZN57 461 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 NUP37Q8NFH4 326 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 SPOCK3Q9BQ16 436 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 NCOR1P1Q9H4R4 102 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 TMEM30BQ3MIR4 351 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 RNF185Q96GF1 192 aa11.75□□□□□ -0.53
BRF1-211ENST00000547530 IGKV3D-20A0A0C4DH25 116 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 SYT8Q8NBV8 401 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 PRTN3P24158 256 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 RAB9AP51151 201 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 CKS1BP61024 79 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 LINC00311Q8N616 119 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 NXT2Q9NPJ8 142 aaKnown RBP11.74□□□□□ -0.53
BRF1-211ENST00000547530 HHLA3Q9XRX5 114 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 CHTOPQ9Y3Y2 248 aaKnown RBP11.74□□□□□ -0.53
BRF1-211ENST00000547530 JMJD1CQ15652 2540 aa11.74□□□□□ -0.53
BRF1-211ENST00000547530 A0A1B0GW15 77 aa11.73□□□□□ -0.53
BRF1-211ENST00000547530 GNRH2O43555 120 aa11.73□□□□□ -0.53
BRF1-211ENST00000547530 RAB1BQ9H0U4 201 aa11.73□□□□□ -0.53
BRF1-211ENST00000547530 JPT2Q9H910 190 aa11.73□□□□□ -0.53
BRF1-211ENST00000547530 BRD3OSQ6XYD6 125 aa11.73□□□□□ -0.53
BRF1-211ENST00000547530 VMO1Q7Z5L0 202 aa11.73□□□□□ -0.53
BRF1-211ENST00000547530 ADARB2-AS1A8MUL3 147 aa11.72□□□□□ -0.53
BRF1-211ENST00000547530 ATP6V0E1O15342 81 aa11.72□□□□□ -0.53
BRF1-211ENST00000547530 HOXA3O43365 443 aaPredicted RBP11.72□□□□□ -0.53
BRF1-211ENST00000547530 CRYGBP07316 175 aa11.72□□□□□ -0.53
BRF1-211ENST00000547530 NDUFS8O00217 210 aa11.71□□□□□ -0.53
BRF1-211ENST00000547530 PRSS2P07478 247 aa11.71□□□□□ -0.53
BRF1-211ENST00000547530 IGFL2Q6UWQ7 119 aa11.71□□□□□ -0.53
BRF1-211ENST00000547530 CIDEAO60543 219 aa11.71□□□□□ -0.54
BRF1-211ENST00000547530 PRADC1Q9BSG0 188 aa11.71□□□□□ -0.54
BRF1-211ENST00000547530 B9A039 149 aa11.7□□□□□ -0.54
BRF1-211ENST00000547530 SCGB2A1O75556 95 aa11.7□□□□□ -0.54
BRF1-211ENST00000547530 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
BRF1-211ENST00000547530 SRSF1Q07955 248 aaKnown RBP eCLIP11.7□□□□□ -0.54
BRF1-211ENST00000547530 DPF1Q92782 380 aa11.7□□□□□ -0.54
BRF1-211ENST00000547530 PLEKHB2Q96CS7 222 aa11.7□□□□□ -0.54
BRF1-211ENST00000547530 INS-IGF2F8WCM5 200 aa11.7□□□□□ -0.54
BRF1-211ENST00000547530 ATP5LO75964 103 aa11.7□□□□□ -0.54
BRF1-211ENST00000547530 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
BRF1-211ENST00000547530 FOXI2Q6ZQN5 318 aa11.7□□□□□ -0.54
BRF1-211ENST00000547530 OPRPNQ99935 248 aaPredicted RBP11.7□□□□□ -0.54
BRF1-211ENST00000547530 OVOL3O00110 214 aa11.69□□□□□ -0.54
BRF1-211ENST00000547530 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
BRF1-211ENST00000547530 ZNF493Q6ZR52 646 aa11.69□□□□□ -0.54
BRF1-211ENST00000547530 A0A0U1RRA0 63 aa11.69□□□□□ -0.54
BRF1-211ENST00000547530 CDSNQ15517 529 aa11.69□□□□□ -0.54
BRF1-211ENST00000547530 LYPD1Q8N2G4 141 aa11.69□□□□□ -0.54
BRF1-211ENST00000547530 METTL26Q96S19 204 aa11.69□□□□□ -0.54
BRF1-211ENST00000547530 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
BRF1-211ENST00000547530 CCDC144NLQ6NUI1 221 aa11.68□□□□□ -0.54
BRF1-211ENST00000547530 TRAV26-1A0A087WT03 109 aa11.68□□□□□ -0.54
BRF1-211ENST00000547530 RNASE13Q5GAN3 156 aaKnown RBP11.68□□□□□ -0.54
BRF1-211ENST00000547530 KIR2DL4Q99706 377 aa11.68□□□□□ -0.54
BRF1-211ENST00000547530 ABCA2Q9BZC7 2435 aa11.68□□□□□ -0.54
BRF1-211ENST00000547530 IGLV11-55A0A075B6I3 123 aa11.68□□□□□ -0.54
BRF1-211ENST00000547530 ABCA12Q86UK0 2595 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 MRPS12O15235 138 aaKnown RBP11.67□□□□□ -0.54
BRF1-211ENST00000547530 IGHV4-39P01824 125 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 CRYBG3Q68DQ2 2970 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 C2orf66Q6UXQ4 117 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 Q8N8P6 123 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 IGHG4P01861 327 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 PF4V1P10720 104 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 SPANXB1Q9NS25 103 aaPredicted RBP11.67□□□□□ -0.54
BRF1-211ENST00000547530 F8W735 103 aaPredicted RBP11.67□□□□□ -0.54
BRF1-211ENST00000547530 DUSP14O95147 198 aaKnown RBP11.67□□□□□ -0.54
BRF1-211ENST00000547530 PRR9Q5T870 116 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 NAV2Q8IVL1 2488 aa11.67□□□□□ -0.54
BRF1-211ENST00000547530 TRAV2A0A0B4J234 112 aa11.66□□□□□ -0.54
BRF1-211ENST00000547530 A0A1B0GV72 72 aa11.66□□□□□ -0.54
BRF1-211ENST00000547530 IGLC6P0CF74 106 aa11.66□□□□□ -0.54
BRF1-211ENST00000547530 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
BRF1-211ENST00000547530 PRSS29PA6NIE9 313 aa11.66□□□□□ -0.54
BRF1-211ENST00000547530 PIEZO1Q92508 2521 aa11.66□□□□□ -0.54
BRF1-211ENST00000547530 ZFP36P26651 326 aaKnown RBP11.65□□□□□ -0.54
BRF1-211ENST00000547530 FN1P02751 2386 aaKnown RBP11.65□□□□□ -0.54
BRF1-211ENST00000547530 HRNRQ86YZ3 2850 aaPredicted RBP11.65□□□□□ -0.54
BRF1-211ENST00000547530 MT-ATP8P03928 68 aa11.65□□□□□ -0.54
BRF1-211ENST00000547530 TRAV12-2A0A075B6T6 113 aa11.65□□□□□ -0.54
BRF1-211ENST00000547530 CEACAM4O75871 244 aa11.65□□□□□ -0.54
BRF1-211ENST00000547530 PDE6HQ13956 83 aa11.65□□□□□ -0.54
BRF1-211ENST00000547530 ZFHX3Q15911 3703 aa11.65□□□□□ -0.55
BRF1-211ENST00000547530 MYMXA0A1B0GTQ4 84 aa11.64□□□□□ -0.55
BRF1-211ENST00000547530 H7C1H1 209 aa11.64□□□□□ -0.55
BRF1-211ENST00000547530 RRN3P1Q2M238 152 aa11.64□□□□□ -0.55
BRF1-211ENST00000547530 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms