RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 A0A1W2PPM0 123 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 SPRY2O43597 315 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 ZFAND2AQ8N6M9 145 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 MOB4Q9Y3A3 225 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 AKAP6Q13023 2319 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 SOCS3O14543 225 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 SAP30O75446 220 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 DEFB1P60022 68 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 C9orf139Q6ZV77 190 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 MAPKAPK5-AS1Q8N8E1 139 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 LENEPQ9Y5L5 61 aa11.6□□□□□ -0.55
CNN3-207ENST00000545882 ZFHX3Q15911 3703 aa11.59□□□□□ -0.55
CNN3-207ENST00000545882 A0A087WX48 190 aa11.59□□□□□ -0.55
CNN3-207ENST00000545882 HLA-DRB4P13762 266 aa11.59□□□□□ -0.55
CNN3-207ENST00000545882 GNLYP22749 145 aa11.59□□□□□ -0.55
CNN3-207ENST00000545882 GCSHP23434 173 aa11.59□□□□□ -0.55
CNN3-207ENST00000545882 ARL3P36405 182 aa11.59□□□□□ -0.55
CNN3-207ENST00000545882 MYOZ3Q8TDC0 251 aa11.59□□□□□ -0.55
CNN3-207ENST00000545882 PHLDA1Q8WV24 401 aaPredicted RBP11.59□□□□□ -0.55
CNN3-207ENST00000545882 HLA-DRB4X5D2U9 266 aa11.59□□□□□ -0.55
CNN3-207ENST00000545882 J3KRW8 73 aa11.58□□□□□ -0.55
CNN3-207ENST00000545882 SMIM13P0DJ93 91 aa11.58□□□□□ -0.55
CNN3-207ENST00000545882 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.55
CNN3-207ENST00000545882 MRAP2Q96G30 205 aa11.58□□□□□ -0.55
CNN3-207ENST00000545882 VPS25Q9BRG1 176 aa11.58□□□□□ -0.55
CNN3-207ENST00000545882 AGRNO00468 2067 aa11.58□□□□□ -0.56
CNN3-207ENST00000545882 LINC00477Q96M19 166 aa11.58□□□□□ -0.56
CNN3-207ENST00000545882 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
CNN3-207ENST00000545882 BRD3OSQ6XYD6 125 aa11.57□□□□□ -0.56
CNN3-207ENST00000545882 RASL10AQ92737 203 aa11.57□□□□□ -0.56
CNN3-207ENST00000545882 TM2D2Q9BX73 214 aa11.57□□□□□ -0.56
CNN3-207ENST00000545882 SPCS1Q9Y6A9 102 aa11.57□□□□□ -0.56
CNN3-207ENST00000545882 MUC4Q99102 2169 aa11.57□□□□□ -0.56
CNN3-207ENST00000545882 IGHV1-69DA0A0B4J2H0 117 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 RNF223E7ERA6 249 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 K7ERJ3 54 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 K7ERU9 68 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 IGHV1-69P01742 117 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 IGHV4-39P01824 125 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 FAM19A4Q96LR4 140 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 NDUFA4O00483 81 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 SAMD5Q5TGI4 173 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 NEGR1Q7Z3B1 354 aa11.56□□□□□ -0.56
CNN3-207ENST00000545882 OVOL1O14753 267 aa11.55□□□□□ -0.56
CNN3-207ENST00000545882 ANXA2RQ3ZCQ2 193 aa11.55□□□□□ -0.56
CNN3-207ENST00000545882 CEND1Q8N111 149 aa11.55□□□□□ -0.56
CNN3-207ENST00000545882 RPL39LQ96EH5 51 aaKnown RBP11.55□□□□□ -0.56
CNN3-207ENST00000545882 MEGF9Q9H1U4 602 aa11.55□□□□□ -0.56
CNN3-207ENST00000545882 TRAV12-1A0A0B4J245 112 aa11.54□□□□□ -0.56
CNN3-207ENST00000545882 TRAV21A0A0B4J279 112 aa11.54□□□□□ -0.56
CNN3-207ENST00000545882 K7EMI3 77 aa11.54□□□□□ -0.56
CNN3-207ENST00000545882 M0R381 172 aa11.54□□□□□ -0.56
CNN3-207ENST00000545882 OR5A1Q8NGJ0 315 aa11.54□□□□□ -0.56
CNN3-207ENST00000545882 F6UB75 175 aa11.54□□□□□ -0.56
CNN3-207ENST00000545882 SUMO2P61956 95 aaKnown RBP11.54□□□□□ -0.56
CNN3-207ENST00000545882 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
CNN3-207ENST00000545882 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
CNN3-207ENST00000545882 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.53□□□□□ -0.56
CNN3-207ENST00000545882 IGHV3-11P01762 117 aa11.53□□□□□ -0.56
CNN3-207ENST00000545882 FABP2P12104 132 aa11.53□□□□□ -0.56
CNN3-207ENST00000545882 C14orf178Q8N769 122 aaPredicted RBP11.53□□□□□ -0.56
CNN3-207ENST00000545882 TOMM6Q96B49 74 aa11.53□□□□□ -0.56
CNN3-207ENST00000545882 KLK15Q9H2R5 256 aa11.53□□□□□ -0.56
CNN3-207ENST00000545882 DPH3P1Q9H4G8 78 aa11.53□□□□□ -0.56
CNN3-207ENST00000545882 F8VRH5 84 aa11.52□□□□□ -0.56
CNN3-207ENST00000545882 G3V4G9 280 aa11.52□□□□□ -0.56
CNN3-207ENST00000545882 GNRH2O43555 120 aa11.52□□□□□ -0.56
CNN3-207ENST00000545882 LY6EQ16553 131 aa11.52□□□□□ -0.56
CNN3-207ENST00000545882 NEXN-AS1Q8NBZ9 246 aa11.52□□□□□ -0.56
CNN3-207ENST00000545882 C20orf78Q9BR46 151 aa11.52□□□□□ -0.56
CNN3-207ENST00000545882 NHP2Q9NX24 153 aaKnown RBP11.52□□□□□ -0.56
CNN3-207ENST00000545882 IGHV4-61A0A0C4DH41 118 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 H7C1H1 209 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 BRI3O95415 125 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 IGHG2P01859 326 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 RNASE3P12724 160 aaKnown RBP11.52□□□□□ -0.57
CNN3-207ENST00000545882 PLNP26678 52 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 RNASE4P34096 147 aaKnown RBP11.52□□□□□ -0.57
CNN3-207ENST00000545882 ASIPP42127 132 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 Q6ZS46 218 aa11.52□□□□□ -0.57
CNN3-207ENST00000545882 MED14OSP0DP75 135 aa11.51□□□□□ -0.57
CNN3-207ENST00000545882 SCGB3A1Q96QR1 104 aa11.51□□□□□ -0.57
CNN3-207ENST00000545882 SPOCK3Q9BQ16 436 aa11.51□□□□□ -0.57
CNN3-207ENST00000545882 PHLDA3Q9Y5J5 127 aa11.51□□□□□ -0.57
CNN3-207ENST00000545882 SLC25A16P16260 332 aa11.5□□□□□ -0.57
CNN3-207ENST00000545882 S100A4P26447 101 aaKnown RBP11.5□□□□□ -0.57
CNN3-207ENST00000545882 TAL2Q16559 108 aa11.5□□□□□ -0.57
CNN3-207ENST00000545882 LCNL1Q6ZST4 164 aa11.5□□□□□ -0.57
CNN3-207ENST00000545882 CHTOPQ9Y3Y2 248 aaKnown RBP11.5□□□□□ -0.57
CNN3-207ENST00000545882 CELSR1Q9NYQ6 3014 aa11.5□□□□□ -0.57
CNN3-207ENST00000545882 A6NDX4 124 aa11.5□□□□□ -0.57
CNN3-207ENST00000545882 USMG5Q96IX5 58 aa11.5□□□□□ -0.57
CNN3-207ENST00000545882 PKD1L2Q7Z442 2459 aa11.5□□□□□ -0.57
CNN3-207ENST00000545882 SPTAN1Q13813 2472 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms