RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SPIN2BQ9BPZ2 258 aa3.91□□□□□ -1.78
DDB1-219ENST00000541513 DUSP21Q9H596 190 aa3.91□□□□□ -1.78
DDB1-219ENST00000541513 RPUSD1Q9UJJ7 312 aaKnown RBP3.91□□□□□ -1.78
DDB1-219ENST00000541513 DOCK11Q5JSL3 2073 aa3.91□□□□□ -1.78
DDB1-219ENST00000541513 ITPR3Q14573 2671 aa3.9□□□□□ -1.78
DDB1-219ENST00000541513 IGHV3-66A0A0C4DH42 116 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 A0A1W2PPR1 153 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 GABARAPH6UMI1 98 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 J3QRE1 110 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 LST1O00453 97 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 NFYBP25208 207 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 OPRK1P41145 380 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 RPS11P62280 158 aaKnown RBP eCLIP3.9□□□□□ -1.79
DDB1-219ENST00000541513 MPV17L2Q567V2 206 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 MRPL54Q6P161 138 aaKnown RBP3.9□□□□□ -1.79
DDB1-219ENST00000541513 UNQ5815/PRO19632Q6UWF5 114 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 Q6ZS49 121 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 PRR15Q8IV56 129 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 ZNF645Q8N7E2 425 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 OTOSQ8NHW6 89 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 TMEM14AQ9Y6G1 99 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 TANC2Q9HCD6 1990 aa3.9□□□□□ -1.79
DDB1-219ENST00000541513 AKAP9Q99996 3911 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 MED13LQ71F56 2210 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 IRGMA1A4Y4 181 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 IZUMO1RA6ND01 250 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 A8MUN3 132 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 INS-IGF2F8WCM5 200 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 M0R135 149 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 FSHBP01225 129 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 IGHV3-13P01766 116 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 HSPB1P04792 205 aaKnown RBP3.89□□□□□ -1.79
DDB1-219ENST00000541513 PIPP12273 146 aaPredicted RBP3.89□□□□□ -1.79
DDB1-219ENST00000541513 SNCAP37840 140 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 RPS27P42677 84 aaKnown RBP3.89□□□□□ -1.79
DDB1-219ENST00000541513 TMEM258P61165 79 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 RTL8BQ17RB0 113 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 Q6AWC8 147 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 MORN3Q6PF18 240 aaPredicted RBP3.89□□□□□ -1.79
DDB1-219ENST00000541513 SGMS2Q8NHU3 365 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 SLC25A40Q8TBP6 338 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 SPTSSAQ969W0 71 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 BORCS8Q96FH0 119 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 ZNF799Q96GE5 643 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 AMELYQ99218 206 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 IMUPQ9GZP8 106 aa3.89□□□□□ -1.79
DDB1-219ENST00000541513 AMMECR1Q9Y4X0 333 aaPredicted RBP3.89□□□□□ -1.79
DDB1-219ENST00000541513 FLNAP21333 2647 aaKnown RBP3.89□□□□□ -1.79
DDB1-219ENST00000541513 WNK2Q9Y3S1 2297 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 TLN2Q9Y4G6 2542 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.88□□□□□ -1.796e-9■■■■□ 23.2
DDB1-219ENST00000541513 ACANP16112 2415 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 IGLV3-9A0A075B6K5 115 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 TRGV10A0A0A0MS01 117 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 E7EQL1 145 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 K7EP34 96 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
DDB1-219ENST00000541513 MSMO1Q15800 293 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 TDRG1Q3Y452 100 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 LAIR2Q6ISS4 152 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 ZNF322Q6U7Q0 402 aaPredicted RBP3.88□□□□□ -1.79
DDB1-219ENST00000541513 Q6ZUT4 128 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 NR2C2APQ86WQ0 139 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 SAXO1Q8IYX7 474 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 ZNF101Q8IZC7 436 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 OR4B1Q8NGF8 309 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 MRPL30Q8TCC3 161 aaKnown RBP3.88□□□□□ -1.79
DDB1-219ENST00000541513 RPS4Y2Q8TD47 263 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 C2orf50Q96LR7 162 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 TM2D3Q9BRN9 247 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 RPP21Q9H633 154 aaKnown RBP3.88□□□□□ -1.79
DDB1-219ENST00000541513 NPVFQ9HCQ7 196 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 TPRKBQ9Y3C4 175 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 LINC00312Q9Y6C7 94 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 CELSR1Q9NYQ6 3014 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 ZANQ9Y493 2812 aa3.88□□□□□ -1.79
DDB1-219ENST00000541513 OTOGQ6ZRI0 2925 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 IGKV1-6A0A0C4DH72 117 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 FAM236AA0A1B0GUQ0 79 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 FAM236BA0A1B0GV22 79 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 IGLC7A0M8Q6 106 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 TMEM262E9PQX1 116 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 CFDP00746 253 aaPredicted RBP3.87□□□□□ -1.79
DDB1-219ENST00000541513 IGKV1-39P01597 117 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 IGKV1D-39P04432 117 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 SEC11BP0C7V7 166 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 CXCL5P42830 114 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 KRTAP10-9P60411 292 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 RRN3P1Q2M238 152 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 LGALSLQ3ZCW2 172 aaPredicted RBP3.87□□□□□ -1.79
DDB1-219ENST00000541513 HEPN1Q6WQI6 88 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 WDR86Q86TI4 376 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 SLC25A42Q86VD7 318 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 ORMDL3Q8N138 153 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 C3orf22Q8N5N4 141 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 C20orf203Q8NBC4 194 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 OR10AC1Q8NH08 325 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 KLF14Q8TD94 323 aaPredicted RBP3.87□□□□□ -1.79
DDB1-219ENST00000541513 FGF23Q9GZV9 251 aaPredicted RBP3.87□□□□□ -1.79
DDB1-219ENST00000541513 OTORQ9NRC9 128 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms