RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 SPTSSAQ969W0 71 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 ZNF32P17041 273 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 TMEM75Q8N9X5 138 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 TAF15Q92804 592 aaKnown RBP eCLIP4.78□□□□□ -1.64
LMO3-225ENST00000541295 SPTA1P02549 2419 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 PIGBOS1A0A0B4J2F0 54 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 M0R135 149 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 PPYP01298 95 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 INAFM2P0DMQ5 153 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 MYO7BQ6PIF6 2116 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 TREML4Q6UXN2 200 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 ZNF414Q96IQ9 312 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 X6R8D5 127 aa4.78□□□□□ -1.64
LMO3-225ENST00000541295 SLC25A16P16260 332 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 C5orf38Q86SI9 138 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 MDP1Q86V88 176 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 LINC01356Q8N9X3 169 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 ZNF714Q96N38 554 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 OSTCQ9NRP0 149 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 KIAA2026Q5HYC2 2103 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 TRBV25-1A0A075B6N4 114 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 LINC01619G3V211 115 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 ZNF73O43830 326 aaPredicted RBP4.77□□□□□ -1.65
LMO3-225ENST00000541295 WISP2O76076 250 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 HBDP02042 147 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 GYPEP15421 78 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 MFAP2P55001 183 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 C10orf128Q5T292 105 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 CLEC19AQ6UXS0 136 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 FGFBP3Q8TAT2 258 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 NABP2Q9BQ15 211 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 SPRR3Q9UBC9 169 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 ASPMQ8IZT6 3477 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 PIEZO2Q9H5I5 2752 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 LINC01549A6NIU2 74 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 CNEP1R1Q8N9A8 125 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 ESM1Q9NQ30 184 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 AKAP13Q12802 2813 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 PTPRBP23467 1997 aa4.77□□□□□ -1.65
LMO3-225ENST00000541295 DOCK11Q5JSL3 2073 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 MGAQ8IWI9 3026 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 ATXN8Q156A1 80 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 TMEM30BQ3MIR4 351 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 RUSC1-AS1Q66K80 236 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 UNQ9165/PRO28630Q6UXU0 137 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 LINC00173Q6ZV60 143 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
LMO3-225ENST00000541295 CD177Q8N6Q3 437 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 GVQW1Q8N7I0 195 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 VSIG2Q96IQ7 327 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 PRR14LQ5THK1 2151 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 CFPP27918 469 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 UBE2D3P61077 147 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 UBE2D2P62837 147 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 FAM120AOSQ5T036 256 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 SLC50A1Q9BRV3 221 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 SLC25A22Q9H936 323 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 IGF2RP11717 2491 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 TRAV8-3A0A0A6YYJ7 113 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 RBMY1BA6NDE4 496 aaKnown RBP4.76□□□□□ -1.65
LMO3-225ENST00000541295 RBMY1EA6NEQ0 496 aaKnown RBP4.76□□□□□ -1.65
LMO3-225ENST00000541295 PEX7O00628 323 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 RBMY1DP0C7P1 496 aaKnown RBP4.76□□□□□ -1.65
LMO3-225ENST00000541295 RBMY1A1P0DJD3 496 aaKnown RBP4.76□□□□□ -1.65
LMO3-225ENST00000541295 CKS2P33552 79 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 GNB1P62873 340 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 CIRBPQ14011 172 aaKnown RBP4.76□□□□□ -1.65
LMO3-225ENST00000541295 RBMY1FQ15415 496 aaKnown RBP4.76□□□□□ -1.65
LMO3-225ENST00000541295 FAM27BQ5VT28 67 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 RFESDQ8TAC1 157 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 FANCD2OSQ96PS1 177 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 ZNF747Q9BV97 191 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 TIMM9Q9Y5J7 89 aa4.76□□□□□ -1.65
LMO3-225ENST00000541295 SPTBN4Q9H254 2564 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 C9JCJ5 164 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 F5H697 171 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 C2orf82Q6UX34 121 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 BOD1L1Q8NFC6 3051 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 PCNX1Q96RV3 2341 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 CFAP47Q6ZTR5 3102 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 NBASA2RRP1 2371 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 TPRP12270 2363 aaKnown RBP4.75□□□□□ -1.65
LMO3-225ENST00000541295 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.75□□□□□ -1.65
LMO3-225ENST00000541295 M0R378 163 aa4.75□□□□□ -1.65
LMO3-225ENST00000541295 M0R381 172 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 GFRA3O60609 400 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 MDFIQ99750 246 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 ANKRD11Q6UB99 2663 aaPredicted RBP4.74□□□□□ -1.65
LMO3-225ENST00000541295 SFTA2Q6UW10 78 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 LCA10Q71F78 164 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 IFI27L1Q96BM0 104 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 ZNF503Q96F45 646 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 SLC25A15Q9Y619 301 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 V9GYV3 84 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 FRYQ5TBA9 3013 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 INTS1Q8N201 2190 aaKnown RBP4.74□□□□□ -1.65
LMO3-225ENST00000541295 NSUN5P1Q3KNT7 163 aa4.74□□□□□ -1.65
LMO3-225ENST00000541295 FOXL2NBQ6ZUU3 175 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms