RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 C9orf139Q6ZV77 190 aa10.12□□□□□ -0.79
PRICKLE3-205ENST00000540849 MRPL35Q9NZE8 188 aaKnown RBP10.12□□□□□ -0.79
PRICKLE3-205ENST00000540849 LENEPQ9Y5L5 61 aa10.12□□□□□ -0.79
PRICKLE3-205ENST00000540849 PKD1L2Q7Z442 2459 aa10.12□□□□□ -0.79
PRICKLE3-205ENST00000540849 SRSF1Q07955 248 aaKnown RBP eCLIP10.11□□□□□ -0.797e-8■□□□□ 9.2
PRICKLE3-205ENST00000540849 TMEM160Q9NX00 188 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 CHD6Q8TD26 2715 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 TRBV25-1A0A075B6N4 114 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 TRAV40A0A0B4J280 105 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 J3KRW8 73 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 K7ERU9 68 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 ARL3P36405 182 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 GPHB5Q86YW7 130 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 MRAP2Q96G30 205 aa10.11□□□□□ -0.79
PRICKLE3-205ENST00000540849 SPRY2O43597 315 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 TRBV12-3P01733 135 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 SMIM13P0DJ93 91 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 UNQ9165/PRO28630Q6UXU0 137 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 LINC00477Q96M19 166 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 K7ERJ3 54 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 HLA-DRB4P13762 266 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 CRIP2P52943 208 aaPredicted RBP10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 ZFAND2AQ8N6M9 145 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 HLA-DRB4X5D2U9 266 aa10.1□□□□□ -0.79
PRICKLE3-205ENST00000540849 A0A087WX48 190 aa10.09□□□□□ -0.79
PRICKLE3-205ENST00000540849 DEFB1P60022 68 aa10.09□□□□□ -0.79
PRICKLE3-205ENST00000540849 MAPKAPK5-AS1Q8N8E1 139 aa10.09□□□□□ -0.79
PRICKLE3-205ENST00000540849 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
PRICKLE3-205ENST00000540849 COL12A1Q99715 3063 aa10.09□□□□□ -0.79
PRICKLE3-205ENST00000540849 SOCS3O14543 225 aa10.09□□□□□ -0.79
PRICKLE3-205ENST00000540849 OR10J6PQ8NGY7 276 aa10.09□□□□□ -0.79
PRICKLE3-205ENST00000540849 MED13LQ71F56 2210 aa10.08□□□□□ -0.8
PRICKLE3-205ENST00000540849 TRAV21A0A0B4J279 112 aa10.08□□□□□ -0.8
PRICKLE3-205ENST00000540849 NDUFA4O00483 81 aa10.08□□□□□ -0.8
PRICKLE3-205ENST00000540849 OVOL1O14753 267 aa10.08□□□□□ -0.8
PRICKLE3-205ENST00000540849 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
PRICKLE3-205ENST00000540849 MEGF9Q9H1U4 602 aa10.08□□□□□ -0.8
PRICKLE3-205ENST00000540849 SVEP1Q4LDE5 3571 aa10.08□□□□□ -0.8
PRICKLE3-205ENST00000540849 NBASA2RRP1 2371 aa10.08□□□□□ -0.8
PRICKLE3-205ENST00000540849 IGHV1-69DA0A0B4J2H0 117 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 M0R381 172 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 IGHV1-69P01742 117 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 SAMD5Q5TGI4 173 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 CEND1Q8N111 149 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 OR5A1Q8NGJ0 315 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 C19orf84I3L1E1 186 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 FABP2P12104 132 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 BRD3OSQ6XYD6 125 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 RASL10AQ92737 203 aa10.07□□□□□ -0.8
PRICKLE3-205ENST00000540849 ATRXP46100 2492 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 K7EMI3 77 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 S100A4P26447 101 aaKnown RBP10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 PLNP26678 52 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 ORMDL2Q53FV1 153 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 NEGR1Q7Z3B1 354 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 TM2D2Q9BX73 214 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 IGHV4-39P01824 125 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 ASIPP42127 132 aa10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 NHP2Q9NX24 153 aaKnown RBP10.06□□□□□ -0.8
PRICKLE3-205ENST00000540849 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 SUMO2P61956 95 aaKnown RBP10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 ANXA2RQ3ZCQ2 193 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 USMG5Q96IX5 58 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 FAM19A4Q96LR4 140 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 C20orf78Q9BR46 151 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 KLK15Q9H2R5 256 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 DPH3P1Q9H4G8 78 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 F6UB75 175 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 F8VRH5 84 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 H7C1H1 209 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 IGHV3-11P01762 117 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 CLEC2AQ6UVW9 174 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 C14orf178Q8N769 122 aaPredicted RBP10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 TOMM6Q96B49 74 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 PHLDA3Q9Y5J5 127 aa10.05□□□□□ -0.8
PRICKLE3-205ENST00000540849 H3BUA1 57 aa10.04□□□□□ -0.8
PRICKLE3-205ENST00000540849 RPL11P62913 178 aaKnown RBP10.04□□□□□ -0.8
PRICKLE3-205ENST00000540849 LY6DQ14210 128 aa10.04□□□□□ -0.8
PRICKLE3-205ENST00000540849 SCGB3A1Q96QR1 104 aa10.04□□□□□ -0.8
PRICKLE3-205ENST00000540849 G3V4G9 280 aa10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 BRI3O95415 125 aa10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 MGPP08493 103 aa10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 MED14OSP0DP75 135 aa10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 SLC25A16P16260 332 aa10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 LY6EQ16553 131 aa10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 ZFHX3Q15911 3703 aa10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 RNASE4P34096 147 aaKnown RBP10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 TAL2Q16559 108 aa10.03□□□□□ -0.8
PRICKLE3-205ENST00000540849 ABCA2Q9BZC7 2435 aa10.02□□□□□ -0.8
PRICKLE3-205ENST00000540849 IGSF10Q6WRI0 2623 aa10.02□□□□□ -0.8
PRICKLE3-205ENST00000540849 GNRH2O43555 120 aa10.02□□□□□ -0.81
PRICKLE3-205ENST00000540849 RIPPLY3P57055 190 aa10.02□□□□□ -0.81
PRICKLE3-205ENST00000540849 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms