RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SPINK13Q1W4C9 94 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 ODF3L2Q3SX64 289 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 TRBV7-9A0A0J9YWB2 115 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 FXYD7P58549 80 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 RPS20P60866 119 aaKnown RBP18.18■□□□□ 0.5
TTC3-225ENST00000540756 KRTAP24-1Q3LI83 254 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 GFI1BQ5VTD9 330 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 AMTNQ6UX39 209 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 FER1L6-AS1Q8NA97 138 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 TRAV21A0A0B4J279 112 aa18.17■□□□□ 0.5
TTC3-225ENST00000540756 IGLV1-51P01701 117 aa18.17■□□□□ 0.5
TTC3-225ENST00000540756 Q6AWC8 147 aa18.17■□□□□ 0.5
TTC3-225ENST00000540756 RASL11AQ6T310 242 aa18.17■□□□□ 0.5
TTC3-225ENST00000540756 RBMY1BA6NDE4 496 aaKnown RBP18.16■□□□□ 0.5
TTC3-225ENST00000540756 RBMY1EA6NEQ0 496 aaKnown RBP18.16■□□□□ 0.5
TTC3-225ENST00000540756 RBMY1DP0C7P1 496 aaKnown RBP18.16■□□□□ 0.5
TTC3-225ENST00000540756 TRAV12-3A0A0B4J271 114 aa18.16■□□□□ 0.5
TTC3-225ENST00000540756 H3BMM0 161 aa18.16■□□□□ 0.5
TTC3-225ENST00000540756 HLA-DQA1P01909 254 aa18.16■□□□□ 0.5
TTC3-225ENST00000540756 DUSP14O95147 198 aaKnown RBP18.15■□□□□ 0.5
TTC3-225ENST00000540756 HLA-DRB4P13762 266 aa18.15■□□□□ 0.5
TTC3-225ENST00000540756 ANXA2RQ3ZCQ2 193 aa18.15■□□□□ 0.5
TTC3-225ENST00000540756 HLA-DRB4X5D2U9 266 aa18.15■□□□□ 0.5
TTC3-225ENST00000540756 APCSP02743 223 aa18.15■□□□□ 0.5
TTC3-225ENST00000540756 MT-ND6P03923 174 aa18.15■□□□□ 0.5
TTC3-225ENST00000540756 SPRY2O43597 315 aa18.14■□□□□ 0.49
TTC3-225ENST00000540756 CTRLP40313 264 aa18.14■□□□□ 0.49
TTC3-225ENST00000540756 COX19Q49B96 90 aa18.14■□□□□ 0.49
TTC3-225ENST00000540756 ODF3Q96PU9 254 aa18.14■□□□□ 0.49
TTC3-225ENST00000540756 PRIMA1Q86XR5 153 aa18.13■□□□□ 0.49
TTC3-225ENST00000540756 MSRB1Q9NZV6 116 aa18.13■□□□□ 0.49
TTC3-225ENST00000540756 GNRH2O43555 120 aa18.13■□□□□ 0.49
TTC3-225ENST00000540756 ZNF324O75467 553 aaPredicted RBP18.13■□□□□ 0.49
TTC3-225ENST00000540756 LEPP41159 167 aa18.13■□□□□ 0.49
TTC3-225ENST00000540756 CDKN1BP46527 198 aa18.13■□□□□ 0.49
TTC3-225ENST00000540756 C7orf71A4D174 169 aa18.12■□□□□ 0.49
TTC3-225ENST00000540756 RIGQ13278 110 aa18.12■□□□□ 0.49
TTC3-225ENST00000540756 NTF3P20783 257 aa18.11■□□□□ 0.49
TTC3-225ENST00000540756 CD7P09564 240 aa18.11■□□□□ 0.49
TTC3-225ENST00000540756 PDZD11Q5EBL8 140 aa18.11■□□□□ 0.49
TTC3-225ENST00000540756 TIMM8BQ9Y5J9 83 aaPredicted RBP18.11■□□□□ 0.49
TTC3-225ENST00000540756 OR10AG1Q8NH19 301 aa18.1■□□□□ 0.49
TTC3-225ENST00000540756 F2Z2F3 143 aa18.1■□□□□ 0.49
TTC3-225ENST00000540756 H3BVH4 76 aa18.1■□□□□ 0.49
TTC3-225ENST00000540756 UBE2CO00762 179 aa18.1■□□□□ 0.49
TTC3-225ENST00000540756 TWIST1Q15672 202 aa18.1■□□□□ 0.49
TTC3-225ENST00000540756 BORCS7Q96B45 105 aa18.1■□□□□ 0.49
TTC3-225ENST00000540756 WFDC10AQ9H1F0 79 aa18.1■□□□□ 0.49
TTC3-225ENST00000540756 STAB1Q9NY15 2570 aa18.09■□□□□ 0.49
TTC3-225ENST00000540756 A8MTW9 85 aa18.09■□□□□ 0.49
TTC3-225ENST00000540756 RBMY1A1P0DJD3 496 aaKnown RBP18.09■□□□□ 0.49
TTC3-225ENST00000540756 RBMY1CP0DJD4 496 aa18.09■□□□□ 0.49
TTC3-225ENST00000540756 HOXA5P20719 270 aa18.09■□□□□ 0.49
TTC3-225ENST00000540756 SRIP30626 198 aa18.09■□□□□ 0.49
TTC3-225ENST00000540756 RBMY1FQ15415 496 aaKnown RBP18.09■□□□□ 0.49
TTC3-225ENST00000540756 IFITM10A6NMD0 228 aa18.08■□□□□ 0.49
TTC3-225ENST00000540756 CRXO43186 299 aaPredicted RBP18.08■□□□□ 0.49
TTC3-225ENST00000540756 TP53TG3Q9ULZ0 132 aa18.08■□□□□ 0.49
TTC3-225ENST00000540756 OR11H12B2RN74 326 aa18.08■□□□□ 0.48
TTC3-225ENST00000540756 CNFNQ9BYD5 112 aa18.08■□□□□ 0.48
TTC3-225ENST00000540756 TSPOP30536 169 aa18.07■□□□□ 0.48
TTC3-225ENST00000540756 TMEM256Q8N2U0 113 aa18.06■□□□□ 0.48
TTC3-225ENST00000540756 MUC4Q99102 2169 aa18.06■□□□□ 0.48
TTC3-225ENST00000540756 BEAN1Q3B7T3 259 aa18.06■□□□□ 0.48
TTC3-225ENST00000540756 NUPR1O60356 82 aa18.05■□□□□ 0.48
TTC3-225ENST00000540756 FAM159AQ6UWV7 190 aa18.05■□□□□ 0.48
TTC3-225ENST00000540756 GATD1Q8NB37 220 aa18.05■□□□□ 0.48
TTC3-225ENST00000540756 C19orf73Q9NVV2 129 aa18.05■□□□□ 0.48
TTC3-225ENST00000540756 SNAI2O43623 268 aa18.04■□□□□ 0.48
TTC3-225ENST00000540756 OR5AL1P0C617 328 aa18.04■□□□□ 0.48
TTC3-225ENST00000540756 RNASE3P12724 160 aaKnown RBP18.04■□□□□ 0.48
TTC3-225ENST00000540756 ASIPP42127 132 aa18.04■□□□□ 0.48
TTC3-225ENST00000540756 AMN1Q8IY45 258 aa18.04■□□□□ 0.48
TTC3-225ENST00000540756 HIST3H2BBQ8N257 126 aa18.04■□□□□ 0.48
TTC3-225ENST00000540756 A0A1B0GW15 77 aa18.03■□□□□ 0.48
TTC3-225ENST00000540756 S100A4P26447 101 aaKnown RBP18.03■□□□□ 0.48
TTC3-225ENST00000540756 COA6Q5JTJ3 125 aaKnown RBP18.03■□□□□ 0.48
TTC3-225ENST00000540756 ZNF493Q6ZR52 646 aa18.03■□□□□ 0.48
TTC3-225ENST00000540756 OR2K2Q8NGT1 345 aa18.03■□□□□ 0.48
TTC3-225ENST00000540756 ALKBH7Q9BT30 221 aaPredicted RBP18.03■□□□□ 0.48
TTC3-225ENST00000540756 LOC102724200A0A096LPH7 203 aaPredicted RBP18.03■□□□□ 0.48
TTC3-225ENST00000540756 PRM2P04554 102 aa18.03■□□□□ 0.48
TTC3-225ENST00000540756 LINC00310P59036 64 aa18.03■□□□□ 0.48
TTC3-225ENST00000540756 IQCJQ1A5X6 159 aa18.03■□□□□ 0.48
TTC3-225ENST00000540756 STHQ8IWL8 128 aa18.02■□□□□ 0.48
TTC3-225ENST00000540756 AKR1D1P51857 326 aa18.01■□□□□ 0.47
TTC3-225ENST00000540756 S100A8P05109 93 aa18.01■□□□□ 0.47
TTC3-225ENST00000540756 TDRG1Q3Y452 100 aa18■□□□□ 0.47
TTC3-225ENST00000540756 SPANXN1Q5VSR9 72 aa18■□□□□ 0.47
TTC3-225ENST00000540756 TRPT1Q86TN4 253 aaKnown RBP18■□□□□ 0.47
TTC3-225ENST00000540756 Q8N1Y9 231 aa18■□□□□ 0.47
TTC3-225ENST00000540756 RCHY1Q96PM5 261 aa18■□□□□ 0.47
TTC3-225ENST00000540756 MDFICQ9P1T7 246 aa18■□□□□ 0.47
TTC3-225ENST00000540756 M0R381 172 aa17.99■□□□□ 0.47
TTC3-225ENST00000540756 EVI2AP22794 236 aa17.99■□□□□ 0.47
TTC3-225ENST00000540756 C18orf32Q8TCD1 76 aa17.99■□□□□ 0.47
TTC3-225ENST00000540756 SCRT2Q9NQ03 307 aa17.99■□□□□ 0.47
TTC3-225ENST00000540756 COL6A5A8TX70 2615 aa17.99■□□□□ 0.47
TTC3-225ENST00000540756 IGHV1OR15-1A0A075B7D0 117 aa17.99■□□□□ 0.47
TTC3-225ENST00000540756 HTN1P15515 57 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms