RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 RNF212Q495C1 297 aa9.4□□□□□ -0.9
CCDC130-202ENST00000540216 CST9LP1Q5W188 147 aa9.4□□□□□ -0.9
CCDC130-202ENST00000540216 Q86TA4 180 aa9.4□□□□□ -0.9
CCDC130-202ENST00000540216 FMC1Q96HJ9 113 aa9.4□□□□□ -0.9
CCDC130-202ENST00000540216 SDF2L1Q9HCN8 221 aa9.4□□□□□ -0.9
CCDC130-202ENST00000540216 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
CCDC130-202ENST00000540216 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
CCDC130-202ENST00000540216 OR5I1Q13606 314 aa9.39□□□□□ -0.91
CCDC130-202ENST00000540216 SLC51BQ86UW2 128 aa9.39□□□□□ -0.91
CCDC130-202ENST00000540216 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
CCDC130-202ENST00000540216 MDFICQ9P1T7 246 aa9.39□□□□□ -0.91
CCDC130-202ENST00000540216 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 TRAV26-1A0A087WT03 109 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 TRAV34A0A0B4J273 112 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 TRBV6-1A0A0K0K1D8 114 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 TEX46H3BTG2 121 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 PAGE4O60829 102 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 HOXA5P20719 270 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 ZNF80P51504 273 aaPredicted RBP9.38□□□□□ -0.91
CCDC130-202ENST00000540216 UBE2G1P62253 170 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 RASL10AQ92737 203 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 LINC00479Q96M42 142 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
CCDC130-202ENST00000540216 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
CCDC130-202ENST00000540216 IGHV3-16A0A0C4DH30 117 aa9.37□□□□□ -0.91
CCDC130-202ENST00000540216 NUDT3O95989 172 aa9.37□□□□□ -0.91
CCDC130-202ENST00000540216 TYMSP04818 313 aa9.37□□□□□ -0.91
CCDC130-202ENST00000540216 AKR1C3P42330 323 aa9.37□□□□□ -0.91
CCDC130-202ENST00000540216 SULT1A2P50226 295 aa9.37□□□□□ -0.91
CCDC130-202ENST00000540216 COX8CQ7Z4L0 72 aa9.37□□□□□ -0.91
CCDC130-202ENST00000540216 MANBALQ9NQG1 85 aa9.37□□□□□ -0.91
CCDC130-202ENST00000540216 MUC4Q99102 2169 aa9.37□□□□□ -0.91
CCDC130-202ENST00000540216 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
CCDC130-202ENST00000540216 DNAH1Q9P2D7 4330 aa9.36□□□□□ -0.91
CCDC130-202ENST00000540216 A0A1B0GV50 99 aa9.36□□□□□ -0.91
CCDC130-202ENST00000540216 M0R2P5 195 aa9.36□□□□□ -0.91
CCDC130-202ENST00000540216 GNRH2O43555 120 aa9.36□□□□□ -0.91
CCDC130-202ENST00000540216 S100A9P06702 114 aaKnown RBP9.36□□□□□ -0.91
CCDC130-202ENST00000540216 SLAQ13239 276 aa9.36□□□□□ -0.91
CCDC130-202ENST00000540216 C9orf62Q8N4C0 152 aa9.36□□□□□ -0.91
CCDC130-202ENST00000540216 EPPK1P58107 5090 aaKnown RBP9.35□□□□□ -0.91
CCDC130-202ENST00000540216 FABP5P3A8MUU1 101 aa9.35□□□□□ -0.91
CCDC130-202ENST00000540216 LTAP01374 205 aa9.35□□□□□ -0.91
CCDC130-202ENST00000540216 CCL18P55774 89 aa9.35□□□□□ -0.91
CCDC130-202ENST00000540216 TXNDC17Q9BRA2 123 aa9.35□□□□□ -0.91
CCDC130-202ENST00000540216 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
CCDC130-202ENST00000540216 A0A0J9YY99 117 aa9.34□□□□□ -0.91
CCDC130-202ENST00000540216 PRO0255Q9UI72 69 aa9.34□□□□□ -0.91
CCDC130-202ENST00000540216 BIRC6Q9NR09 4857 aa9.34□□□□□ -0.91
CCDC130-202ENST00000540216 TRAV4A0A0B4J268 109 aa9.33□□□□□ -0.92
CCDC130-202ENST00000540216 IGHV3-53P01767 116 aa9.33□□□□□ -0.92
CCDC130-202ENST00000540216 FAM162BQ5T6X4 162 aa9.33□□□□□ -0.92
CCDC130-202ENST00000540216 PTH2Q96A98 100 aa9.33□□□□□ -0.92
CCDC130-202ENST00000540216 ZC2HC1AQ96GY0 325 aa9.33□□□□□ -0.92
CCDC130-202ENST00000540216 VSIG2Q96IQ7 327 aa9.33□□□□□ -0.92
CCDC130-202ENST00000540216 C9orf85Q96MD7 179 aa9.33□□□□□ -0.92
CCDC130-202ENST00000540216 GNG13Q9P2W3 67 aa9.33□□□□□ -0.92
CCDC130-202ENST00000540216 TRGV4A0A0C4DH28 118 aa9.32□□□□□ -0.92
CCDC130-202ENST00000540216 SCO2A0A1W2PP80 73 aa9.32□□□□□ -0.92
CCDC130-202ENST00000540216 PAX4O43316 350 aa9.32□□□□□ -0.92
CCDC130-202ENST00000540216 IFNA1P01562 189 aa9.32□□□□□ -0.92
CCDC130-202ENST00000540216 ASIPP42127 132 aa9.32□□□□□ -0.92
CCDC130-202ENST00000540216 FHL2Q14192 279 aa9.32□□□□□ -0.92
CCDC130-202ENST00000540216 HHLA3Q9XRX5 114 aa9.32□□□□□ -0.92
CCDC130-202ENST00000540216 IGKV3D-20A0A0C4DH25 116 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 A0A1B0GVG6 124 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 CIDEAO60543 219 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 SH2D1AO60880 128 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 TAGLN2P37802 199 aaKnown RBP9.31□□□□□ -0.92
CCDC130-202ENST00000540216 CRYBA4P53673 196 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 CCL20P78556 96 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 ZNF674Q2M3X9 581 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 PIK3CD-AS1Q5SR53 167 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 OR4C5Q8NGB2 326 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 C11orf52Q96A22 123 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 ZNF479Q96JC4 524 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 ICOSQ9Y6W8 199 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 NACAE9PAV3 2078 aa9.31□□□□□ -0.92
CCDC130-202ENST00000540216 A0A096LPF7 62 aa9.3□□□□□ -0.92
CCDC130-202ENST00000540216 B4DEV8 164 aa9.3□□□□□ -0.92
CCDC130-202ENST00000540216 ORM1P02763 201 aa9.3□□□□□ -0.92
CCDC130-202ENST00000540216 SFTA3P0C7M3 94 aa9.3□□□□□ -0.92
CCDC130-202ENST00000540216 RNASE3P12724 160 aaKnown RBP9.3□□□□□ -0.92
CCDC130-202ENST00000540216 S100A4P26447 101 aaKnown RBP9.3□□□□□ -0.92
CCDC130-202ENST00000540216 ZNF876PQ49A33 203 aa9.3□□□□□ -0.92
CCDC130-202ENST00000540216 DNLZQ5SXM8 178 aa9.3□□□□□ -0.92
CCDC130-202ENST00000540216 LINC00588Q9Y4M8 146 aa9.3□□□□□ -0.92
CCDC130-202ENST00000540216 KRBOX1C9JBD0 128 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 C9JCJ5 164 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 PDE6DO43924 150 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 CRIP1P50238 77 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 MEF2BQ02080 365 aaPredicted RBP9.29□□□□□ -0.92
CCDC130-202ENST00000540216 MRPL23Q16540 153 aaKnown RBP9.29□□□□□ -0.92
CCDC130-202ENST00000540216 LINC01559Q495D7 138 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 Q6ZR54 194 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 BAGE2Q86Y30 109 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 ZNRF2Q8NHG8 242 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
CCDC130-202ENST00000540216 IGLV2-18A0A075B6J9 118 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms