RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 HES1Q14469 280 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 TANC2Q9HCD6 1990 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 IGHV3OR16-10A0A075B7F0 116 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 IGHV4-61A0A0C4DH41 118 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 A0A1W2PPR1 153 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 LOXL3P58215 753 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 TSPAN13O95857 204 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 CCL3L1P16619 93 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 RPL32P62910 135 aaKnown RBP6.84□□□□□ -1.31
DDB1-217ENST00000540166 DUX4L9Q6RFH8 374 aaPredicted RBP6.84□□□□□ -1.31
DDB1-217ENST00000540166 SLC25A39Q9BZJ4 359 aaPredicted RBP6.84□□□□□ -1.31
DDB1-217ENST00000540166 ATMQ13315 3056 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 COL12A1Q99715 3063 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 ATRQ13535 2644 aa6.84□□□□□ -1.32
DDB1-217ENST00000540166 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 FAM90A1Q86YD7 464 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 SCGB3A1Q96QR1 104 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 C9JAW5 83 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 M0R3E3 92 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 C1orf122Q6ZSJ8 110 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 ODF1Q14990 250 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 C3orf36Q3SXR2 165 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 TMEM155Q4W5P6 130 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 KHDC1LQ5JSQ8 128 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 SPANXN1Q5VSR9 72 aa6.83□□□□□ -1.32
DDB1-217ENST00000540166 MYMXA0A1B0GTQ4 84 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 SRRM4A7MD48 611 aaKnown RBP6.82□□□□□ -1.32
DDB1-217ENST00000540166 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 UTF1Q5T230 341 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 TRGV9Q99603 122 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 FCN3O75636 299 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 C17orf58Q2M2W7 97 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 TMEM78Q5T7P6 136 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 NDUFA4L2Q9NRX3 87 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 RPUSD1Q9UJJ7 312 aaKnown RBP6.82□□□□□ -1.32
DDB1-217ENST00000540166 SH2D1AO60880 128 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 DLX1P56177 255 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 LAGE3Q14657 143 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 POU2AF1Q16633 256 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 DUX5Q96PT3 197 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 H7C1H1 209 aa6.82□□□□□ -1.32
DDB1-217ENST00000540166 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
DDB1-217ENST00000540166 ZNF256Q9Y2P7 627 aaPredicted RBP6.82□□□□□ -1.32
DDB1-217ENST00000540166 SPRNQ5BIV9 151 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 DDB2Q92466 427 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 FABP5P3A8MUU1 101 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 WT1-ASQ06250 92 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 OR11H6Q8NGC7 330 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 LINC00312Q9Y6C7 94 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 ZNF785A8K8V0 405 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 HLA-DRB4P13762 266 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 S100A4P26447 101 aaKnown RBP6.81□□□□□ -1.32
DDB1-217ENST00000540166 C1orf229Q6ZS94 237 aaPredicted RBP6.81□□□□□ -1.32
DDB1-217ENST00000540166 C10orf126Q8N4M7 172 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 TMEM75Q8N9X5 138 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 HLA-DRB4X5D2U9 266 aa6.81□□□□□ -1.32
DDB1-217ENST00000540166 ASIPP42127 132 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 C8orf49Q96NF6 230 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 FAM110AQ9BQ89 295 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 TMEM133Q9H2Q1 129 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 TRAV2A0A0B4J234 112 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 SLC25A20O43772 301 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 COX7A1P24310 79 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 THAP8Q8NA92 274 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 RAX2Q96IS3 184 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 AGRNO00468 2067 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 DSCAML1Q8TD84 2053 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 OVOL3O00110 214 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 IGLV1-44P01699 117 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 IGHV1-46P01743 117 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 IGHV4-31P0DP07 118 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 PRB3Q04118 309 aaPredicted RBP6.8□□□□□ -1.32
DDB1-217ENST00000540166 FAM159AQ6UWV7 190 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 ANKRD29Q8N6D5 301 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 OR10J6PQ8NGY7 276 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 TMEM167AQ8TBQ9 72 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
DDB1-217ENST00000540166 J3QLI3 93 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 TMEM30BQ3MIR4 351 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 CFAP126Q5VTH2 177 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 MALRD1Q5VYJ5 2156 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 TENM4Q6N022 2769 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 TET2Q6N021 2002 aaPredicted RBP6.79□□□□□ -1.32
DDB1-217ENST00000540166 COX6CP09669 75 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 GP9P14770 177 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 C15orf53Q8NAA6 179 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 KIR2DL4Q99706 377 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 GAFA1Q96PS6 74 aa6.79□□□□□ -1.32
DDB1-217ENST00000540166 IGKV2-40A0A087WW87 121 aaPredicted RBP6.78□□□□□ -1.32
DDB1-217ENST00000540166 A0A087WX48 190 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 A0A096LNJ9 63 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 F8VRH5 84 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 IGKV2D-40P01614 121 aaPredicted RBP6.78□□□□□ -1.32
DDB1-217ENST00000540166 MYCNOSP40205 109 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 ZFP2Q6ZN57 461 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 ZNF493Q6ZR52 646 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 MAPKAPK5-AS1Q8N8E1 139 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms