RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ASIPP42127 132 aa12.83□□□□□ -0.35
LTBR-207ENST00000539925 PROK1P58294 105 aa12.83□□□□□ -0.35
LTBR-207ENST00000539925 S100A12P80511 92 aa12.83□□□□□ -0.35
LTBR-207ENST00000539925 DEFB114Q30KQ6 69 aa12.83□□□□□ -0.35
LTBR-207ENST00000539925 PRR9Q5T870 116 aa12.83□□□□□ -0.35
LTBR-207ENST00000539925 CITED2Q99967 270 aaPredicted RBP12.83□□□□□ -0.35
LTBR-207ENST00000539925 NIT2Q9NQR4 276 aa12.83□□□□□ -0.35
LTBR-207ENST00000539925 NUPR1O60356 82 aa12.83□□□□□ -0.36
LTBR-207ENST00000539925 HSBP1O75506 76 aa12.83□□□□□ -0.36
LTBR-207ENST00000539925 ORMDL3Q8N138 153 aa12.83□□□□□ -0.36
LTBR-207ENST00000539925 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.36
LTBR-207ENST00000539925 U3KQK5 164 aa12.83□□□□□ -0.36
LTBR-207ENST00000539925 NOTCH2Q04721 2471 aa12.82□□□□□ -0.36
LTBR-207ENST00000539925 C7orf71A4D174 169 aa12.82□□□□□ -0.36
LTBR-207ENST00000539925 S100A4P26447 101 aaKnown RBP12.82□□□□□ -0.36
LTBR-207ENST00000539925 AMTP48728 403 aa12.82□□□□□ -0.36
LTBR-207ENST00000539925 ZFHX3Q15911 3703 aa12.82□□□□□ -0.36
LTBR-207ENST00000539925 CDKN1BP46527 198 aa12.81□□□□□ -0.36
LTBR-207ENST00000539925 CMC4P56277 68 aaPredicted RBP12.81□□□□□ -0.36
LTBR-207ENST00000539925 IQCJQ1A5X6 159 aa12.81□□□□□ -0.36
LTBR-207ENST00000539925 TMEM61Q8N0U2 210 aa12.81□□□□□ -0.36
LTBR-207ENST00000539925 A8MTW9 85 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 SPANXN1Q5VSR9 72 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 FAM159AQ6UWV7 190 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 RCHY1Q96PM5 261 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 DUX3Q96PT4 197 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 NAGKQ9UJ70 344 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 ZNF469Q96JG9 3925 aaPredicted RBP12.8□□□□□ -0.36
LTBR-207ENST00000539925 DEFB1P60022 68 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 TDRG1Q3Y452 100 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 ANXA2RQ3ZCQ2 193 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 NDUFA11Q86Y39 141 aa12.8□□□□□ -0.36
LTBR-207ENST00000539925 A0A1W2PRX2 142 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 J3KRW8 73 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 LINC00614P0C842 121 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 HLA-DRB4P13762 266 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 RNASEKQ6P5S7 137 aaKnown RBP12.79□□□□□ -0.36
LTBR-207ENST00000539925 NIT1Q86X76 327 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 AMN1Q8IY45 258 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 OR2K2Q8NGT1 345 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 CLUHP3Q96NS8 147 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 SELENOKQ9Y6D0 94 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 HLA-DRB4X5D2U9 266 aa12.79□□□□□ -0.36
LTBR-207ENST00000539925 CKS2P33552 79 aa12.78□□□□□ -0.36
LTBR-207ENST00000539925 C11orf44Q8N8P7 122 aa12.78□□□□□ -0.36
LTBR-207ENST00000539925 PRELID3AQ96N28 172 aa12.78□□□□□ -0.36
LTBR-207ENST00000539925 SCRT2Q9NQ03 307 aa12.78□□□□□ -0.36
LTBR-207ENST00000539925 MTORP42345 2549 aa12.78□□□□□ -0.36
LTBR-207ENST00000539925 INAFM1C9JVW0 142 aa12.77□□□□□ -0.36
LTBR-207ENST00000539925 H3BVH4 76 aa12.77□□□□□ -0.36
LTBR-207ENST00000539925 CD33P20138 364 aa12.77□□□□□ -0.36
LTBR-207ENST00000539925 DEFB131AP59861 70 aa12.77□□□□□ -0.36
LTBR-207ENST00000539925 CD300EQ496F6 205 aaPredicted RBP12.77□□□□□ -0.36
LTBR-207ENST00000539925 MRPL51Q4U2R6 128 aaKnown RBP12.77□□□□□ -0.36
LTBR-207ENST00000539925 PHLDA3Q9Y5J5 127 aa12.77□□□□□ -0.36
LTBR-207ENST00000539925 D6R8Y8 96 aa12.77□□□□□ -0.37
LTBR-207ENST00000539925 CRLF1O75462 422 aa12.77□□□□□ -0.37
LTBR-207ENST00000539925 OR10AG1Q8NH19 301 aa12.77□□□□□ -0.37
LTBR-207ENST00000539925 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
LTBR-207ENST00000539925 MUC21A0A0G2JKD1 596 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 MUC21A0A140T8X8 626 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 H3BMM0 161 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 M0R2Z0 102 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 MUC21Q5SSG8 566 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 AMTNQ6UX39 209 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 Q6ZWC4 215 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 PRSS3P2Q8NHM4 247 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 AP5S1Q9NUS5 200 aa12.75□□□□□ -0.37
LTBR-207ENST00000539925 SSTP61278 116 aa12.74□□□□□ -0.37
LTBR-207ENST00000539925 MRAP2Q96G30 205 aa12.74□□□□□ -0.37
LTBR-207ENST00000539925 RNF185Q96GF1 192 aa12.74□□□□□ -0.37
LTBR-207ENST00000539925 MAP6D1Q9H9H5 199 aa12.74□□□□□ -0.37
LTBR-207ENST00000539925 MSRB1Q9NZV6 116 aa12.74□□□□□ -0.37
LTBR-207ENST00000539925 TRAV12-3A0A0B4J271 114 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 NXPH4O95158 308 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 SCGB1D1O95968 90 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 FAM110AQ9BQ89 295 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 C20orf144Q9BQM9 153 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
LTBR-207ENST00000539925 TRGV11A0A075B6L2 103 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 IGHV1OR15-1A0A075B7D0 117 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 Q6ZQT7 251 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 AP1S3Q96PC3 154 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 MAP1LC3AQ9H492 121 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 AKAP9Q99996 3911 aa12.73□□□□□ -0.37
LTBR-207ENST00000539925 ANK3Q12955 4377 aaKnown RBP12.72□□□□□ -0.37
LTBR-207ENST00000539925 ADARB2-AS1A8MUL3 147 aa12.72□□□□□ -0.37
LTBR-207ENST00000539925 CD7P09564 240 aa12.72□□□□□ -0.37
LTBR-207ENST00000539925 RNASE3P12724 160 aaKnown RBP12.72□□□□□ -0.37
LTBR-207ENST00000539925 SPINK13Q1W4C9 94 aa12.72□□□□□ -0.37
LTBR-207ENST00000539925 URB1-AS1Q96HZ7 61 aa12.72□□□□□ -0.37
LTBR-207ENST00000539925 DPH3P1Q9H4G8 78 aa12.72□□□□□ -0.37
LTBR-207ENST00000539925 PPP1R17O96001 155 aa12.71□□□□□ -0.37
LTBR-207ENST00000539925 IGKV3-20P01619 116 aa12.71□□□□□ -0.37
LTBR-207ENST00000539925 KIR3DS1Q14943 382 aa12.71□□□□□ -0.37
LTBR-207ENST00000539925 FAM19A2Q8N3H0 131 aa12.71□□□□□ -0.37
LTBR-207ENST00000539925 DEFB125Q8N687 156 aa12.71□□□□□ -0.37
LTBR-207ENST00000539925 NXT2Q9NPJ8 142 aaKnown RBP12.71□□□□□ -0.37
LTBR-207ENST00000539925 HSPB8Q9UJY1 196 aa12.71□□□□□ -0.37
LTBR-207ENST00000539925 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms