RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 C18orf32Q8TCD1 76 aa16.79■□□□□ 0.28
HOMER3-204ENST00000539827 RCHY1Q96PM5 261 aa16.79■□□□□ 0.28
HOMER3-204ENST00000539827 NAGKQ9UJ70 344 aa16.79■□□□□ 0.28
HOMER3-204ENST00000539827 DYNLRB2Q8TF09 96 aa16.78■□□□□ 0.28
HOMER3-204ENST00000539827 LOC102724200A0A096LPH7 203 aaPredicted RBP16.78■□□□□ 0.28
HOMER3-204ENST00000539827 TRAV21A0A0B4J279 112 aa16.77■□□□□ 0.28
HOMER3-204ENST00000539827 TWIST1Q15672 202 aa16.77■□□□□ 0.28
HOMER3-204ENST00000539827 A0A0J9YX75 114 aa16.77■□□□□ 0.27
HOMER3-204ENST00000539827 IGKV3-20P01619 116 aa16.77■□□□□ 0.27
HOMER3-204ENST00000539827 FHL3Q13643 280 aa16.77■□□□□ 0.27
HOMER3-204ENST00000539827 NTF3P20783 257 aa16.76■□□□□ 0.27
HOMER3-204ENST00000539827 TMEM61Q8N0U2 210 aa16.76■□□□□ 0.27
HOMER3-204ENST00000539827 TRBV7-9A0A0J9YWB2 115 aa16.75■□□□□ 0.27
HOMER3-204ENST00000539827 EBLN2Q6P2I7 272 aa16.75■□□□□ 0.27
HOMER3-204ENST00000539827 APRG1Q8IVJ8 170 aa16.75■□□□□ 0.27
HOMER3-204ENST00000539827 MSRB1Q9NZV6 116 aa16.75■□□□□ 0.27
HOMER3-204ENST00000539827 PROK1P58294 105 aa16.75■□□□□ 0.27
HOMER3-204ENST00000539827 DEFB114Q30KQ6 69 aa16.75■□□□□ 0.27
HOMER3-204ENST00000539827 ZNF493Q6ZR52 646 aa16.75■□□□□ 0.27
HOMER3-204ENST00000539827 NF1P21359 2839 aa16.74■□□□□ 0.27
HOMER3-204ENST00000539827 DEFA6Q01524 100 aa16.73■□□□□ 0.27
HOMER3-204ENST00000539827 TCF21O43680 179 aa16.73■□□□□ 0.27
HOMER3-204ENST00000539827 FOSL1P15407 271 aa16.73■□□□□ 0.27
HOMER3-204ENST00000539827 ANXA2RQ3ZCQ2 193 aa16.73■□□□□ 0.27
HOMER3-204ENST00000539827 AMN1Q8IY45 258 aa16.73■□□□□ 0.27
HOMER3-204ENST00000539827 KLLNB2CW77 178 aa16.72■□□□□ 0.27
HOMER3-204ENST00000539827 DEFB131AP59861 70 aa16.72■□□□□ 0.27
HOMER3-204ENST00000539827 CD300EQ496F6 205 aaPredicted RBP16.72■□□□□ 0.27
HOMER3-204ENST00000539827 KCNS1Q96KK3 526 aa16.72■□□□□ 0.27
HOMER3-204ENST00000539827 TIMM8BQ9Y5J9 83 aaPredicted RBP16.72■□□□□ 0.27
HOMER3-204ENST00000539827 NSUN5P1Q3KNT7 163 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 FAM104BQ5XKR9 115 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 CNFNQ9BYD5 112 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 SAMD10Q9BYL1 202 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 KNCNA6PVL3 124 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 H3BVH4 76 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 DDTP30046 118 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 LEPP41159 167 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 FOXI2Q6ZQN5 318 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 OR10AG1Q8NH19 301 aa16.71■□□□□ 0.27
HOMER3-204ENST00000539827 DUSP14O95147 198 aaKnown RBP16.7■□□□□ 0.26
HOMER3-204ENST00000539827 TRAV2A0A0B4J234 112 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 PMCHP20382 165 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 KRTAP10-3P60369 221 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 AGRNO00468 2067 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 TRAV12-3A0A0B4J271 114 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 ADARB2-AS1A8MUL3 147 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 M0R2Z0 102 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 GNRH2O43555 120 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 RNASEKQ6P5S7 137 aaKnown RBP16.69■□□□□ 0.26
HOMER3-204ENST00000539827 NIT1Q86X76 327 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 ODF3Q96PU9 254 aa16.69■□□□□ 0.26
HOMER3-204ENST00000539827 SORL1Q92673 2214 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 TRAV12-2A0A075B6T6 113 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 SPRY2O43597 315 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 SCGB1D1O95968 90 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 ZNF124Q15973 351 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 MRPL51Q4U2R6 128 aaKnown RBP16.68■□□□□ 0.26
HOMER3-204ENST00000539827 URB1-AS1Q96HZ7 61 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 C7orf71A4D174 169 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 SNAI2O43623 268 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 OR5AL1P0C617 328 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 FAM19A2Q8N3H0 131 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 TMEM191AQ9H0A3 160 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 PRO1933Q9H354 126 aa16.68■□□□□ 0.26
HOMER3-204ENST00000539827 ASIPP42127 132 aa16.67■□□□□ 0.26
HOMER3-204ENST00000539827 AMTP48728 403 aa16.67■□□□□ 0.26
HOMER3-204ENST00000539827 SPINK13Q1W4C9 94 aa16.67■□□□□ 0.26
HOMER3-204ENST00000539827 D6R8Y8 96 aa16.66■□□□□ 0.26
HOMER3-204ENST00000539827 S100A4P26447 101 aaKnown RBP16.66■□□□□ 0.26
HOMER3-204ENST00000539827 ZNF324O75467 553 aaPredicted RBP16.66■□□□□ 0.26
HOMER3-204ENST00000539827 SPANXN1Q5VSR9 72 aa16.66■□□□□ 0.26
HOMER3-204ENST00000539827 Q6ZWC4 215 aa16.66■□□□□ 0.26
HOMER3-204ENST00000539827 MAP6D1Q9H9H5 199 aa16.66■□□□□ 0.26
HOMER3-204ENST00000539827 SMKR1H3BMG3 65 aa16.65■□□□□ 0.26
HOMER3-204ENST00000539827 CRLF1O75462 422 aa16.65■□□□□ 0.26
HOMER3-204ENST00000539827 FXYD7P58549 80 aa16.65■□□□□ 0.26
HOMER3-204ENST00000539827 AMTNQ6UX39 209 aa16.65■□□□□ 0.26
HOMER3-204ENST00000539827 ZNF664Q8N3J9 261 aa16.65■□□□□ 0.26
HOMER3-204ENST00000539827 RNF185Q96GF1 192 aa16.65■□□□□ 0.26
HOMER3-204ENST00000539827 CACNG7P62955 275 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 U3KQK5 164 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 WNK1Q9H4A3 2382 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 HIVEP1P15822 2718 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 OR4C46A6NHA9 309 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 HSBP1O75506 76 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 TSPOP30536 169 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 CDKN1BP46527 198 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 FAM159AQ6UWV7 190 aa16.64■□□□□ 0.25
HOMER3-204ENST00000539827 SPAG8Q99932 426 aaPredicted RBP16.64■□□□□ 0.25
HOMER3-204ENST00000539827 RAB4AP20338 218 aa16.63■□□□□ 0.25
HOMER3-204ENST00000539827 PRELID3AQ96N28 172 aa16.63■□□□□ 0.25
HOMER3-204ENST00000539827 ZNF256Q9Y2P7 627 aaPredicted RBP16.63■□□□□ 0.25
HOMER3-204ENST00000539827 FN1P02751 2386 aaKnown RBP16.62■□□□□ 0.25
HOMER3-204ENST00000539827 TRAV25A0A0B4J276 109 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 NCR2O95944 276 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 HLA-DRB4P13762 266 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 DMRTA1Q5VZB9 504 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 HLA-DRB4X5D2U9 266 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 SETD2Q9BYW2 2564 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms