RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 S100PP25815 95 aa9.4□□□□□ -0.9
CCDC42-202ENST00000539522 NUTF2P61970 127 aaKnown RBP9.4□□□□□ -0.9
CCDC42-202ENST00000539522 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
CCDC42-202ENST00000539522 PRR27Q6MZM9 219 aa9.4□□□□□ -0.9
CCDC42-202ENST00000539522 ZNF705AQ6ZN79 300 aaPredicted RBP9.4□□□□□ -0.9
CCDC42-202ENST00000539522 ZC2HC1AQ96GY0 325 aa9.4□□□□□ -0.9
CCDC42-202ENST00000539522 C8orf49Q96NF6 230 aa9.4□□□□□ -0.9
CCDC42-202ENST00000539522 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
CCDC42-202ENST00000539522 TP53TG1Q9Y2A0 90 aa9.4□□□□□ -0.9
CCDC42-202ENST00000539522 ZNF705GA8MUZ8 300 aaPredicted RBP9.39□□□□□ -0.91
CCDC42-202ENST00000539522 KLLNB2CW77 178 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 P01737 135 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 PFN1P07737 140 aaKnown RBP9.39□□□□□ -0.91
CCDC42-202ENST00000539522 CRISP2P16562 243 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 LEPP41159 167 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 CRIP1P50238 77 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 GFI1BQ5VTD9 330 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 CBLN2Q8IUK8 224 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 EDA2RQ9HAV5 297 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 V9GYV3 84 aa9.39□□□□□ -0.91
CCDC42-202ENST00000539522 AMBPP02760 352 aa9.38□□□□□ -0.91
CCDC42-202ENST00000539522 TSPOP30536 169 aa9.38□□□□□ -0.91
CCDC42-202ENST00000539522 CDKN1BP46527 198 aa9.38□□□□□ -0.91
CCDC42-202ENST00000539522 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
CCDC42-202ENST00000539522 Q8NAQ8 132 aa9.38□□□□□ -0.91
CCDC42-202ENST00000539522 C1QTNF4Q9BXJ3 329 aa9.38□□□□□ -0.91
CCDC42-202ENST00000539522 IL36BQ9NZH7 164 aa9.38□□□□□ -0.91
CCDC42-202ENST00000539522 U3KQK5 164 aa9.38□□□□□ -0.91
CCDC42-202ENST00000539522 COLCA2A8K830 154 aa9.37□□□□□ -0.91
CCDC42-202ENST00000539522 A8MWL6 223 aa9.37□□□□□ -0.91
CCDC42-202ENST00000539522 ZNF324O75467 553 aaPredicted RBP9.37□□□□□ -0.91
CCDC42-202ENST00000539522 GPX1P07203 203 aa9.37□□□□□ -0.91
CCDC42-202ENST00000539522 CT83Q5H943 113 aa9.37□□□□□ -0.91
CCDC42-202ENST00000539522 OR11H2Q8NH07 326 aa9.37□□□□□ -0.91
CCDC42-202ENST00000539522 BTF3L4Q96K17 158 aa9.37□□□□□ -0.91
CCDC42-202ENST00000539522 RPP21Q9H633 154 aaKnown RBP9.37□□□□□ -0.91
CCDC42-202ENST00000539522 PLECQ15149 4684 aaKnown RBP9.36□□□□□ -0.91
CCDC42-202ENST00000539522 TRAV9-1A0A075B6T8 112 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 FAM231BA6NCW3 169 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 J3KRW8 73 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 SH2D1AO60880 128 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 ZNF80P51504 273 aaPredicted RBP9.36□□□□□ -0.91
CCDC42-202ENST00000539522 ELOBQ15370 118 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 TSKUQ8WUA8 353 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 YPEL4Q96NS1 127 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
CCDC42-202ENST00000539522 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 XKRY2A2RUG3 117 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 TMEM189A5PLL7 270 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 DEFB4AO15263 64 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 INSP01308 110 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 AZU1P20160 251 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 FAM3BP58499 235 aaPredicted RBP9.35□□□□□ -0.91
CCDC42-202ENST00000539522 RPS20P60866 119 aaKnown RBP9.35□□□□□ -0.91
CCDC42-202ENST00000539522 RPL19P84098 196 aaKnown RBP9.35□□□□□ -0.91
CCDC42-202ENST00000539522 PYGO2Q9BRQ0 406 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 GFRA4Q9GZZ7 299 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 URGCP-MRPS24S4R325 110 aa9.35□□□□□ -0.91
CCDC42-202ENST00000539522 TRAV12-3A0A0B4J271 114 aa9.34□□□□□ -0.91
CCDC42-202ENST00000539522 TRAV21A0A0B4J279 112 aa9.34□□□□□ -0.91
CCDC42-202ENST00000539522 IGHV4-28A0A0C4DH34 117 aa9.34□□□□□ -0.91
CCDC42-202ENST00000539522 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
CCDC42-202ENST00000539522 ORM1P02763 201 aa9.34□□□□□ -0.91
CCDC42-202ENST00000539522 RNASE4P34096 147 aaKnown RBP9.34□□□□□ -0.91
CCDC42-202ENST00000539522 FOXA3P55318 350 aaPredicted RBP9.34□□□□□ -0.91
CCDC42-202ENST00000539522 NEU1Q99519 415 aa9.34□□□□□ -0.91
CCDC42-202ENST00000539522 C20orf144Q9BQM9 153 aa9.34□□□□□ -0.91
CCDC42-202ENST00000539522 IGHV3OR16-12A0A075B7B8 117 aa9.33□□□□□ -0.92
CCDC42-202ENST00000539522 C7orf71A4D174 169 aa9.33□□□□□ -0.92
CCDC42-202ENST00000539522 Q6AWC8 147 aa9.33□□□□□ -0.92
CCDC42-202ENST00000539522 ZNF575Q86XF7 245 aa9.33□□□□□ -0.92
CCDC42-202ENST00000539522 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
CCDC42-202ENST00000539522 FAM210BQ96KR6 192 aa9.33□□□□□ -0.92
CCDC42-202ENST00000539522 NAT8BQ9UHF3 227 aa9.33□□□□□ -0.92
CCDC42-202ENST00000539522 TGIF2-C20orf24A0A0A6YYL0 155 aa9.32□□□□□ -0.92
CCDC42-202ENST00000539522 LINC01559Q495D7 138 aa9.32□□□□□ -0.92
CCDC42-202ENST00000539522 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
CCDC42-202ENST00000539522 C11orf21Q9P2W6 132 aa9.32□□□□□ -0.92
CCDC42-202ENST00000539522 GOLT1BQ9Y3E0 138 aa9.32□□□□□ -0.92
CCDC42-202ENST00000539522 A0A1W2PPQ1 181 aa9.31□□□□□ -0.92
CCDC42-202ENST00000539522 CXCL1P09341 107 aa9.31□□□□□ -0.92
CCDC42-202ENST00000539522 RAB5AP20339 215 aa9.31□□□□□ -0.92
CCDC42-202ENST00000539522 C11orf68Q9H3H3 251 aaKnown RBP9.31□□□□□ -0.92
CCDC42-202ENST00000539522 TP53TG3Q9ULZ0 132 aa9.31□□□□□ -0.92
CCDC42-202ENST00000539522 CELA1Q9UNI1 258 aa9.31□□□□□ -0.92
CCDC42-202ENST00000539522 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
CCDC42-202ENST00000539522 TYMSP04818 313 aa9.3□□□□□ -0.92
CCDC42-202ENST00000539522 MIFP14174 115 aa9.3□□□□□ -0.92
CCDC42-202ENST00000539522 TCL1AP56279 114 aa9.3□□□□□ -0.92
CCDC42-202ENST00000539522 NUP35Q8NFH5 326 aa9.3□□□□□ -0.92
CCDC42-202ENST00000539522 GTSF1Q8WW33 167 aa9.3□□□□□ -0.92
CCDC42-202ENST00000539522 IGKV3D-20A0A0C4DH25 116 aa9.29□□□□□ -0.92
CCDC42-202ENST00000539522 COX19Q49B96 90 aa9.29□□□□□ -0.92
CCDC42-202ENST00000539522 C11orf72Q8NBR9 251 aa9.29□□□□□ -0.92
CCDC42-202ENST00000539522 RNASE8Q8TDE3 154 aaKnown RBP9.29□□□□□ -0.92
CCDC42-202ENST00000539522 KCNS1Q96KK3 526 aa9.29□□□□□ -0.92
CCDC42-202ENST00000539522 LINC01587Q99440 93 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms