RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 LINC00643Q86TS7 51 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 FAM216BQ8N7L0 139 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 KLHL30-AS1Q8NEE0 82 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 TET2Q6N021 2002 aaPredicted RBP6.3□□□□□ -1.4
CSRP1-218ENST00000533402 A4D1N5 150 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 NDPQ00604 133 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 ICOSQ9Y6W8 199 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 C5orf64Q2M2E5 130 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 RNF152Q8N8N0 203 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 IGKV1-27A0A075B6S5 117 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 SRRM4A7MD48 611 aaKnown RBP6.3□□□□□ -1.4
CSRP1-218ENST00000533402 CXCL5P42830 114 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 HS3ST6Q96QI5 342 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 ORMDL1Q9P0S3 153 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 PTPRBP23467 1997 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 COL4A4P53420 1690 aaPredicted RBP6.3□□□□□ -1.4
CSRP1-218ENST00000533402 TRBV10-2A0A0K0K1G8 114 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 SMIM9A6NGZ8 99 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 CECR9P0C854 216 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 ZNF837Q96EG3 531 aaPredicted RBP6.3□□□□□ -1.4
CSRP1-218ENST00000533402 RNF5Q99942 180 aa6.3□□□□□ -1.4
CSRP1-218ENST00000533402 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
CSRP1-218ENST00000533402 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
CSRP1-218ENST00000533402 TRAV26-2A0A0B4J265 109 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 FAM223BA6NKX1 122 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 FAM223AQ8IWN6 122 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 C8orf49Q96NF6 230 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 CHCHD2Q9Y6H1 151 aaPredicted RBP6.29□□□□□ -1.4
CSRP1-218ENST00000533402 PDE6HQ13956 83 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 ASPHD1Q5U4P2 390 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 LRRC75A-AS1Q8N1F1 130 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 TRAV25A0A0B4J276 109 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 CLPSL1A2RUU4 121 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 WISP1O95388 367 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 PSG7Q13046 419 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 FAM201AQ5SY85 155 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 NBASA2RRP1 2371 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 CENPVL3A0A0U1RRI6 287 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 C10orf55Q5SWW7 151 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 Q6ZS49 121 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 ATP1A1-AS1Q5TC04 95 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 ZFP2Q6ZN57 461 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 TRPT1Q86TN4 253 aaKnown RBP6.29□□□□□ -1.4
CSRP1-218ENST00000533402 SMIM2Q9BVW6 85 aa6.29□□□□□ -1.4
CSRP1-218ENST00000533402 LINC00473A8K010 186 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 H3BT86 120 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 PAX8Q06710 450 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 LINC00477Q96M19 166 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 TRBV7-1A0A0A6YYK4 115 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 RHODO00212 210 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 K7ENP7 123 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 C5orf24Q7Z6I8 188 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 RETNQ9HD89 108 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 PFN2P35080 140 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 FAM110AQ9BQ89 295 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 LTAP01374 205 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 CRYGSP22914 178 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 RNF144BQ7Z419 303 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 C10orf105Q8TEF2 133 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 CEP350Q5VT06 3117 aa6.28□□□□□ -1.4
CSRP1-218ENST00000533402 TRBV6-6A0A0A6YYG2 114 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 IGLC6P0CF74 106 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 LRP4O75096 1905 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 GATA4P43694 442 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 I3L3M4 83 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 SS18Q15532 418 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 SLC25A29Q8N8R3 303 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 FLVCR1-AS1Q8TAF5 88 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 TFF1P04155 84 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 MSMBP08118 114 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 CCL3L1P16619 93 aa6.27□□□□□ -1.41
CSRP1-218ENST00000533402 HRCT1Q6UXD1 115 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 Q96MF0 132 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 IGHV1OR15-1A0A075B7D0 117 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 SDHAF1A6NFY7 115 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 MLANAQ16655 118 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 IGFL4Q6B9Z1 124 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 Q8N1Y9 231 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 ZNF581Q9P0T4 197 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 CD59P13987 128 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 TCL1BO95988 128 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 IGHV3-11P01762 117 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 IL15RAQ13261 267 aa6.26□□□□□ -1.41
CSRP1-218ENST00000533402 FAM208BQ5VWN6 2430 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 LGALS9O00182 355 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 Q71RC1 249 aaPredicted RBP6.25□□□□□ -1.41
CSRP1-218ENST00000533402 SHANK2-AS3Q9BTD1 123 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 MALRD1Q5VYJ5 2156 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 SORL1Q92673 2214 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 MP68P56378 58 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 BUB3O43684 328 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 C9orf139Q6ZV77 190 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 TTTY13Q9BZ97 58 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 FAM120AOSQ5T036 256 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 IGFBPL1Q8WX77 278 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms