RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 MYL5Q02045 173 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 TAF1AQ15573 450 aaPredicted RBP1.28□□□□□ -2.2
PICALM-221ENST00000533350 TMEM97Q5BJF2 176 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 FAM19A2Q8N3H0 131 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 OR51A2Q8NGJ7 313 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 OR8D4Q8NGM9 314 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 SLC25A40Q8TBP6 338 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 SFT2D1Q8WV19 159 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 C1orf54Q8WWF1 131 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 LYSMD1Q96S90 227 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 UCK1Q9HA47 277 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 TVP23BQ9NYZ1 205 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 BSNQ9UPA5 3926 aa1.28□□□□□ -2.2
PICALM-221ENST00000533350 MED12Q93074 2177 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 ANKRD36A6QL64 1941 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 UQCRHLA0A096LP55 91 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 TRAV3A0A0B4J244 114 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 IGKV1-9A0A0C4DH69 117 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 E5RI56 91 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 CYB5BO43169 146 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 OR4E1P0C645 316 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 CMPK1P30085 196 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 SSR2P43308 183 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
PICALM-221ENST00000533350 LSM6P62312 80 aaKnown RBP1.27□□□□□ -2.21
PICALM-221ENST00000533350 RANP62826 216 aaKnown RBP1.27□□□□□ -2.21
PICALM-221ENST00000533350 BASP1P80723 227 aaKnown RBP1.27□□□□□ -2.21
PICALM-221ENST00000533350 MRPS25P82663 173 aaKnown RBP1.27□□□□□ -2.21
PICALM-221ENST00000533350 TFF3Q07654 80 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 TMED2Q15363 201 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 LINC01554Q52M75 96 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 LYRM7Q5U5X0 104 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 OR52R1Q8NGF1 315 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 OR13D1Q8NGV5 346 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 CCL19Q99731 98 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 HIST1H2BLQ99880 126 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 FBXO5Q9UKT4 447 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 EPDR1Q9UM22 224 aa1.27□□□□□ -2.21
PICALM-221ENST00000533350 UTP11Q9Y3A2 253 aaKnown RBP1.27□□□□□ -2.21
PICALM-221ENST00000533350 DCHS2Q6V1P9 2916 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 FLNAP21333 2647 aaKnown RBP1.26□□□□□ -2.21
PICALM-221ENST00000533350 CXorf51AA0A1B0GTR3 108 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 C7orf71A4D174 169 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 OR2T1O43869 369 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 MIFP14174 115 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 DEFA3P59666 94 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 C12orf74Q32Q52 190 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 SIGMAR1Q99720 223 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 RNASE7Q9H1E1 156 aaKnown RBP1.26□□□□□ -2.21
PICALM-221ENST00000533350 LRTM1Q9HBL6 345 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 RASL12Q9NYN1 266 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 SLC22A13Q9Y226 551 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 SCN8AQ9UQD0 1980 aa1.26□□□□□ -2.21
PICALM-221ENST00000533350 DNAJC13O75165 2243 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 MGAM2Q2M2H8 2515 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 LYNX1G3V0Z9 82 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 APOC4-APOC2K7ER74 178 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 APOC2P02655 101 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 ERP29P30040 261 aaKnown RBP1.25□□□□□ -2.21
PICALM-221ENST00000533350 SRP14P37108 136 aaKnown RBP1.25□□□□□ -2.21
PICALM-221ENST00000533350 EIF5AP63241 154 aaKnown RBP1.25□□□□□ -2.21
PICALM-221ENST00000533350 Q6Q795 121 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 SCIMPQ6UWF3 145 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 RPS27LQ71UM5 84 aaKnown RBP1.25□□□□□ -2.21
PICALM-221ENST00000533350 PLPP5Q8NEB5 264 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 OR2T10Q8NGZ9 312 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 CDC26Q8NHZ8 85 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 NMNAT1Q9HAN9 279 aaPredicted RBP1.25□□□□□ -2.21
PICALM-221ENST00000533350 PROK2Q9HC23 129 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 MED11Q9P086 117 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 C22orf24Q9Y442 160 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 ABCA1O95477 2261 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 SCN3AQ9NY46 2000 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 KIAA1549Q9HCM3 1950 aa1.25□□□□□ -2.21
PICALM-221ENST00000533350 CACNA1CQ13936 2221 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 ANK3Q12955 4377 aaKnown RBP1.24□□□□□ -2.21
PICALM-221ENST00000533350 TRBV6-8A0A0A6YYG3 113 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 DEFB108AA8MXU0 73 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 E2F6O75461 281 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 LYZL6O75951 148 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 ZNF682O95780 498 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 TSNQ15631 228 aaKnown RBP1.24□□□□□ -2.21
PICALM-221ENST00000533350 AKIRIN2Q53H80 203 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 C3orf56Q8N813 242 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 TEX47Q8TBZ9 253 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 GNPDA2Q8TDQ7 276 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 CHMP6Q96FZ7 201 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 BOKQ9UMX3 212 aaPredicted RBP1.24□□□□□ -2.21
PICALM-221ENST00000533350 ARL2BPQ9Y2Y0 163 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 FAM32AQ9Y421 112 aaKnown RBP1.24□□□□□ -2.21
PICALM-221ENST00000533350 EML6Q6ZMW3 1958 aa1.24□□□□□ -2.21
PICALM-221ENST00000533350 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.23□□□□□ -2.21
PICALM-221ENST00000533350 CLDN25C9JDP6 229 aa1.23□□□□□ -2.21
PICALM-221ENST00000533350 REEP5Q00765 189 aa1.23□□□□□ -2.21
PICALM-221ENST00000533350 PRB3Q04118 309 aaPredicted RBP1.23□□□□□ -2.21
PICALM-221ENST00000533350 PDE6HQ13956 83 aa1.23□□□□□ -2.21
PICALM-221ENST00000533350 LIN52Q52LA3 116 aa1.23□□□□□ -2.21
PICALM-221ENST00000533350 C6orf52Q5T4I8 152 aa1.23□□□□□ -2.21
PICALM-221ENST00000533350 PPP1R2P3Q6NXS1 205 aa1.23□□□□□ -2.21
PICALM-221ENST00000533350 TEX261Q6UWH6 196 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms