RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 PYGO2Q9BRQ0 406 aa10.26□□□□□ -0.77
HIF3A-215ENST00000533145 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
HIF3A-215ENST00000533145 V9GYV3 84 aa10.26□□□□□ -0.77
HIF3A-215ENST00000533145 TGP01266 2768 aa10.25□□□□□ -0.77
HIF3A-215ENST00000533145 FRMD6-AS1P0C7T7 363 aa10.25□□□□□ -0.77
HIF3A-215ENST00000533145 RPS20P60866 119 aaKnown RBP10.25□□□□□ -0.77
HIF3A-215ENST00000533145 DNLZQ5SXM8 178 aa10.25□□□□□ -0.77
HIF3A-215ENST00000533145 FAM159AQ6UWV7 190 aa10.25□□□□□ -0.77
HIF3A-215ENST00000533145 ZNF705AQ6ZN79 300 aaPredicted RBP10.25□□□□□ -0.77
HIF3A-215ENST00000533145 Q6ZWC4 215 aa10.25□□□□□ -0.77
HIF3A-215ENST00000533145 RPP21Q9H633 154 aaKnown RBP10.25□□□□□ -0.77
HIF3A-215ENST00000533145 IGHV1OR15-1A0A075B7D0 117 aa10.24□□□□□ -0.77
HIF3A-215ENST00000533145 TMEM189A5PLL7 270 aa10.24□□□□□ -0.77
HIF3A-215ENST00000533145 ZNF705GA8MUZ8 300 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-215ENST00000533145 A8MWL6 223 aa10.24□□□□□ -0.77
HIF3A-215ENST00000533145 ORM1P02763 201 aa10.24□□□□□ -0.77
HIF3A-215ENST00000533145 PRB2P02812 416 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-215ENST00000533145 ANXA2RQ3ZCQ2 193 aa10.24□□□□□ -0.77
HIF3A-215ENST00000533145 OR2D3Q8NGH3 330 aa10.24□□□□□ -0.77
HIF3A-215ENST00000533145 GOLT1BQ9Y3E0 138 aa10.24□□□□□ -0.77
HIF3A-215ENST00000533145 XKRY2A2RUG3 117 aa10.23□□□□□ -0.77
HIF3A-215ENST00000533145 FAM231BA6NCW3 169 aa10.23□□□□□ -0.77
HIF3A-215ENST00000533145 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
HIF3A-215ENST00000533145 LINC01587Q99440 93 aa10.23□□□□□ -0.77
HIF3A-215ENST00000533145 NEU1Q99519 415 aa10.23□□□□□ -0.77
HIF3A-215ENST00000533145 RPS10P5Q9NQ39 176 aa10.23□□□□□ -0.77
HIF3A-215ENST00000533145 TP53TG3Q9ULZ0 132 aa10.23□□□□□ -0.77
HIF3A-215ENST00000533145 RPL19P84098 196 aaKnown RBP10.22□□□□□ -0.77
HIF3A-215ENST00000533145 MUC21Q5SSG8 566 aa10.22□□□□□ -0.77
HIF3A-215ENST00000533145 ATRAIDQ6UW56 229 aa10.22□□□□□ -0.77
HIF3A-215ENST00000533145 TSKUQ8WUA8 353 aa10.22□□□□□ -0.77
HIF3A-215ENST00000533145 RNF183Q96D59 192 aa10.22□□□□□ -0.77
HIF3A-215ENST00000533145 IMMP2LQ96T52 175 aa10.22□□□□□ -0.77
HIF3A-215ENST00000533145 GFRA4Q9GZZ7 299 aa10.22□□□□□ -0.77
HIF3A-215ENST00000533145 TP53TG1Q9Y2A0 90 aa10.22□□□□□ -0.77
HIF3A-215ENST00000533145 NOTCH1P46531 2555 aa10.22□□□□□ -0.77
HIF3A-215ENST00000533145 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.77
HIF3A-215ENST00000533145 GNRH2O43555 120 aa10.21□□□□□ -0.77
HIF3A-215ENST00000533145 TYMSP04818 313 aa10.21□□□□□ -0.77
HIF3A-215ENST00000533145 TMEM208Q9BTX3 173 aa10.21□□□□□ -0.77
HIF3A-215ENST00000533145 IL36BQ9NZH7 164 aa10.21□□□□□ -0.77
HIF3A-215ENST00000533145 TRGV11A0A075B6L2 103 aa10.2□□□□□ -0.78
HIF3A-215ENST00000533145 SMIM27A0A1W2PRY6 76 aa10.2□□□□□ -0.78
HIF3A-215ENST00000533145 CXorf65A6NEN9 183 aa10.2□□□□□ -0.78
HIF3A-215ENST00000533145 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
HIF3A-215ENST00000533145 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
HIF3A-215ENST00000533145 DEFB121Q5J5C9 76 aa10.2□□□□□ -0.78
HIF3A-215ENST00000533145 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
HIF3A-215ENST00000533145 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
HIF3A-215ENST00000533145 NAGKQ9UJ70 344 aa10.2□□□□□ -0.78
HIF3A-215ENST00000533145 A0A1W2PPQ1 181 aa10.19□□□□□ -0.78
HIF3A-215ENST00000533145 DEFB135Q30KP9 77 aa10.19□□□□□ -0.78
HIF3A-215ENST00000533145 ZNF493Q6ZR52 646 aa10.19□□□□□ -0.78
HIF3A-215ENST00000533145 X6R8D5 127 aa10.19□□□□□ -0.78
HIF3A-215ENST00000533145 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 TMSB15BA0A087X1C1 80 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 IGHV3-16A0A0C4DH30 117 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 CBY3A6NI87 242 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 F2Z2F3 143 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 SPRY2O43597 315 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 SNAI2O43623 268 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 OR5AL1P0C617 328 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 GZMBP10144 247 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 RNASE3P12724 160 aaKnown RBP10.18□□□□□ -0.78
HIF3A-215ENST00000533145 ASIPP42127 132 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 RNASE8Q8TDE3 154 aaKnown RBP10.18□□□□□ -0.78
HIF3A-215ENST00000533145 TMEM263Q8WUH6 116 aaKnown RBP10.18□□□□□ -0.78
HIF3A-215ENST00000533145 GTSF1Q8WW33 167 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 SCRT2Q9NQ03 307 aa10.18□□□□□ -0.78
HIF3A-215ENST00000533145 AZU1P20160 251 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 WDR73Q6P4I2 378 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 SBSPONQ8IVN8 264 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 FER1L6-AS1Q8NA97 138 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 C11orf72Q8NBR9 251 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 MRAPQ8TCY5 172 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 C9orf85Q96MD7 179 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 MDFICQ9P1T7 246 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
HIF3A-215ENST00000533145 MUC4Q99102 2169 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 HIGD1CA8MV81 97 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 PRM2P04554 102 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 ARMS2P0C7Q2 107 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 MIFP14174 115 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 HTN1P15515 57 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 S100A4P26447 101 aaKnown RBP10.16□□□□□ -0.78
HIF3A-215ENST00000533145 CTRLP40313 264 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 TCL1AP56279 114 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 NUP35Q8NFH5 326 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 OR11H2Q8NH07 326 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 PTH2Q96A98 100 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 C16orf74Q96GX8 76 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 TM2D3Q9BRN9 247 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 SPXQ9BT56 116 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 CNFNQ9BYD5 112 aa10.16□□□□□ -0.78
HIF3A-215ENST00000533145 SMCO4Q9NRQ5 59 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 245.4 ms