RNA–Protein interactions for RNA: ENST00000532962.5

ALKBH3-210, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 1 (best)

Gene ALKBH3, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-210ENST00000532962 ARMS2P0C7Q2 107 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 IGLC6P0CF74 106 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST1H2BOP23527 126 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST1H2BBP33778 126 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST1H2BDP58876 126 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST1H2BCP62807 126 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 KIR3DS1Q14943 382 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 ZNF124Q15973 351 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST2H2BEQ16778 126 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 SPINK13Q1W4C9 94 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 ODF3L2Q3SX64 289 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 AMTNQ6UX39 209 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 Q6ZQT7 251 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST1H2BHQ93079 126 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST1H2BNQ99877 126 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 HIST1H2BMQ99879 126 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 TRAV12-3A0A0B4J271 114 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 M0R2Z0 102 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 APCSP02743 223 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 CTRLP40313 264 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 ZNF747Q9BV97 191 aa13.45□□□□□ -0.26
ALKBH3-210ENST00000532962 NDUFA6P56556 154 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 BEAN1Q3B7T3 259 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 ANXA2RQ3ZCQ2 193 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 MUC21Q5SSG8 566 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 GFI1BQ5VTD9 330 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 FAM159AQ6UWV7 190 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 ZNF575Q86XF7 245 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 STHQ8IWL8 128 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 C3orf56Q8N813 242 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 CLUHP3Q96NS8 147 aa13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 MCRIP2Q9BUT9 160 aaKnown RBP13.44□□□□□ -0.26
ALKBH3-210ENST00000532962 FBN1P35555 2871 aaKnown RBP13.43□□□□□ -0.26
ALKBH3-210ENST00000532962 SORL1Q92673 2214 aa13.43□□□□□ -0.26
ALKBH3-210ENST00000532962 COL6A5A8TX70 2615 aa13.43□□□□□ -0.26
ALKBH3-210ENST00000532962 TRAV12-2A0A075B6T6 113 aa13.43□□□□□ -0.26
ALKBH3-210ENST00000532962 KCNS1Q96KK3 526 aa13.43□□□□□ -0.26
ALKBH3-210ENST00000532962 FAM110AQ9BQ89 295 aa13.43□□□□□ -0.26
ALKBH3-210ENST00000532962 AGRNO00468 2067 aa13.42□□□□□ -0.26
ALKBH3-210ENST00000532962 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
ALKBH3-210ENST00000532962 ASIPP42127 132 aa13.42□□□□□ -0.26
ALKBH3-210ENST00000532962 FXYD7P58549 80 aa13.42□□□□□ -0.26
ALKBH3-210ENST00000532962 SSTP61278 116 aa13.42□□□□□ -0.26
ALKBH3-210ENST00000532962 C12orf54Q6X4T0 127 aa13.42□□□□□ -0.26
ALKBH3-210ENST00000532962 ZNF324O75467 553 aaPredicted RBP13.41□□□□□ -0.26
ALKBH3-210ENST00000532962 TWIST1Q15672 202 aa13.41□□□□□ -0.26
ALKBH3-210ENST00000532962 ATRQ13535 2644 aa13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 MUC21A0A0G2JKD1 596 aa13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 MUC21A0A140T8X8 626 aa13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 RBMY1BA6NDE4 496 aaKnown RBP13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 RBMY1EA6NEQ0 496 aaKnown RBP13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 AMBPP02760 352 aa13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 OR5AL1P0C617 328 aa13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 RBMY1DP0C7P1 496 aaKnown RBP13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 SNRPEP62304 92 aaKnown RBP13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 CACNG7P62955 275 aa13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 TMEM158Q8WZ71 300 aa13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 SSBP4Q9BWG4 385 aaPredicted RBP13.4□□□□□ -0.26
ALKBH3-210ENST00000532962 LOC105371267A0A1B0GV96 52 aa13.39□□□□□ -0.27
ALKBH3-210ENST00000532962 H3BVH4 76 aa13.39□□□□□ -0.27
ALKBH3-210ENST00000532962 CD7P09564 240 aa13.39□□□□□ -0.27
ALKBH3-210ENST00000532962 NTF3P20783 257 aa13.39□□□□□ -0.27
ALKBH3-210ENST00000532962 KIAA1644Q3SXP7 199 aa13.39□□□□□ -0.27
ALKBH3-210ENST00000532962 SHISA2Q6UWI4 295 aa13.39□□□□□ -0.27
ALKBH3-210ENST00000532962 TIMM8BQ9Y5J9 83 aaPredicted RBP13.39□□□□□ -0.27
ALKBH3-210ENST00000532962 GNRH2O43555 120 aa13.38□□□□□ -0.27
ALKBH3-210ENST00000532962 SNAI2O43623 268 aa13.38□□□□□ -0.27
ALKBH3-210ENST00000532962 MED14OSP0DP75 135 aa13.38□□□□□ -0.27
ALKBH3-210ENST00000532962 NUTF2P61970 127 aaKnown RBP13.38□□□□□ -0.27
ALKBH3-210ENST00000532962 SLAQ13239 276 aa13.38□□□□□ -0.27
ALKBH3-210ENST00000532962 DNLZQ5SXM8 178 aa13.38□□□□□ -0.27
ALKBH3-210ENST00000532962 GATD1Q8NB37 220 aa13.38□□□□□ -0.27
ALKBH3-210ENST00000532962 CNFNQ9BYD5 112 aa13.38□□□□□ -0.27
ALKBH3-210ENST00000532962 IGHV1OR15-1A0A075B7D0 117 aa13.37□□□□□ -0.27
ALKBH3-210ENST00000532962 C5orf52A6NGY3 159 aa13.37□□□□□ -0.27
ALKBH3-210ENST00000532962 TDRG1Q3Y452 100 aa13.37□□□□□ -0.27
ALKBH3-210ENST00000532962 SPANXN1Q5VSR9 72 aa13.37□□□□□ -0.27
ALKBH3-210ENST00000532962 TRPT1Q86TN4 253 aaKnown RBP13.37□□□□□ -0.27
ALKBH3-210ENST00000532962 WFDC9Q8NEX5 89 aa13.37□□□□□ -0.27
ALKBH3-210ENST00000532962 FBN3Q75N90 2809 aa13.36□□□□□ -0.27
ALKBH3-210ENST00000532962 CRXO43186 299 aaPredicted RBP13.36□□□□□ -0.27
ALKBH3-210ENST00000532962 ZNF493Q6ZR52 646 aa13.36□□□□□ -0.27
ALKBH3-210ENST00000532962 SMIM15Q7Z3B0 74 aa13.36□□□□□ -0.27
ALKBH3-210ENST00000532962 GTSCR1Q86UQ5 136 aa13.36□□□□□ -0.27
ALKBH3-210ENST00000532962 SPATA3Q8NHX4 192 aa13.36□□□□□ -0.27
ALKBH3-210ENST00000532962 PHLDA3Q9Y5J5 127 aa13.36□□□□□ -0.27
ALKBH3-210ENST00000532962 INSP01308 110 aa13.35□□□□□ -0.27
ALKBH3-210ENST00000532962 OR10AG1Q8NH19 301 aa13.35□□□□□ -0.27
ALKBH3-210ENST00000532962 C20orf144Q9BQM9 153 aa13.35□□□□□ -0.27
ALKBH3-210ENST00000532962 C19orf73Q9NVV2 129 aa13.35□□□□□ -0.27
ALKBH3-210ENST00000532962 IGHV4-4A0A075B6R2 117 aa13.34□□□□□ -0.27
ALKBH3-210ENST00000532962 LOC102724200A0A096LPH7 203 aaPredicted RBP13.34□□□□□ -0.27
ALKBH3-210ENST00000532962 SRIP30626 198 aa13.34□□□□□ -0.27
ALKBH3-210ENST00000532962 TRGV11A0A075B6L2 103 aa13.33□□□□□ -0.27
ALKBH3-210ENST00000532962 HOXA5P20719 270 aa13.33□□□□□ -0.27
ALKBH3-210ENST00000532962 PRR31Q5SQ13 230 aa13.33□□□□□ -0.27
ALKBH3-210ENST00000532962 TMEM191AQ9H0A3 160 aa13.33□□□□□ -0.27
ALKBH3-210ENST00000532962 SCRT2Q9NQ03 307 aa13.33□□□□□ -0.27
ALKBH3-210ENST00000532962 MSRB1Q9NZV6 116 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms