RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 SERP2Q8N6R1 65 aa2.74□□□□□ -1.97
PTPN22-207ENST00000528414 BMPR1BO00238 502 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 PSPHP1O15172 72 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 SEC61BP60468 96 aaKnown RBP2.73□□□□□ -1.97
PTPN22-207ENST00000528414 LINC00173Q6ZV60 143 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 DIRC1Q969H9 104 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 OPRPNQ99935 248 aaPredicted RBP2.73□□□□□ -1.97
PTPN22-207ENST00000528414 PROK2Q9HC23 129 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 NXT2Q9NPJ8 142 aaKnown RBP2.73□□□□□ -1.97
PTPN22-207ENST00000528414 CKLFQ9UBR5 152 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 EPDR1Q9UM22 224 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF706Q9Y5V0 76 aaPredicted RBP2.73□□□□□ -1.97
PTPN22-207ENST00000528414 IGKV1D-17A0A075B6S4 117 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF736B4DX44 427 aaPredicted RBP2.73□□□□□ -1.97
PTPN22-207ENST00000528414 LTAP01374 205 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF138P52744 262 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 IGLV3-21P80748 117 aaPredicted RBP2.73□□□□□ -1.97
PTPN22-207ENST00000528414 LINC00242Q5T6M2 205 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 TMEM252Q8N6L7 170 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF524Q96C55 264 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 HS3ST6Q96QI5 342 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF286AQ9HBT8 521 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 ARL2-SNX15V9GYD0 113 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 ASCC3Q8N3C0 2202 aaKnown RBP2.73□□□□□ -1.97
PTPN22-207ENST00000528414 DNAH9Q9NYC9 4486 aa2.73□□□□□ -1.97
PTPN22-207ENST00000528414 UBE2L6O14933 153 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 NXPH4O95158 308 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 RPL18Q07020 188 aaKnown RBP2.72□□□□□ -1.97
PTPN22-207ENST00000528414 FAM19A2Q8N3H0 131 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 AKAP13Q12802 2813 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 PINLYPA6NC86 204 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 C15orf62A8K5M9 175 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 UBE2D3P61077 147 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 UBE2D2P62837 147 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 HOXA4Q00056 320 aaPredicted RBP2.72□□□□□ -1.97
PTPN22-207ENST00000528414 LINC01554Q52M75 96 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 NOTCH2NLQ7Z3S9 236 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF702PQ9H963 129 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 SPRR3Q9UBC9 169 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 BPTFQ12830 3046 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 HUWE1Q7Z6Z7 4374 aaKnown RBP2.72□□□□□ -1.97
PTPN22-207ENST00000528414 IGLV3-32A0A0A0MS00 114 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 H7BZZ5 65 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 HBDP02042 147 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 LPAL2Q16609 132 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF876PQ49A33 203 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 C7orf65Q6ZTY9 151 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 ITLN1Q8WWA0 313 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 DOCK11Q5JSL3 2073 aa2.72□□□□□ -1.97
PTPN22-207ENST00000528414 PCNX3Q9H6A9 2034 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 IGHV1-45A0A0A0MS14 117 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 IGKV1-12A0A0C4DH73 117 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 NXPH3O95157 252 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 IGKV1D-12P01611 117 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 CIRBPQ14011 172 aaKnown RBP2.71□□□□□ -1.97
PTPN22-207ENST00000528414 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.97
PTPN22-207ENST00000528414 FAM229BQ4G0N7 80 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 MDP1Q86V88 176 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 LINC01555Q8NAE3 123 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF563Q8TA94 476 aa2.71□□□□□ -1.97
PTPN22-207ENST00000528414 DMDP11532 3685 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 FER1L5A0AVI2 2057 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 IGLV2-8P01709 118 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 HERVK_113P61574 105 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 DEFB121Q5J5C9 76 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 Q6P435 159 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 FAM223AQ8IWN6 122 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 ODF3L1Q8IXM7 274 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 XIRP2A4UGR9 3374 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 MYOFQ9NZM1 2061 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 IGKV3D-11A0A0A0MRZ8 115 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 CCL4P13236 92 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 DYNLT3P51808 116 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 RPS18P62269 152 aaKnown RBP2.71□□□□□ -1.98
PTPN22-207ENST00000528414 ZNF645Q8N7E2 425 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 NKAPP1Q8N9T2 125 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 HERC2O95714 4834 aa2.71□□□□□ -1.98
PTPN22-207ENST00000528414 DSCAMO60469 2012 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 MAP1BP46821 2468 aaKnown RBP2.7□□□□□ -1.98
PTPN22-207ENST00000528414 E7EQL1 145 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 CDK2AP2O75956 126 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 NCBP2P52298 156 aaKnown RBP eCLIP2.7□□□□□ -1.98
PTPN22-207ENST00000528414 RBM3P98179 157 aaKnown RBP2.7□□□□□ -1.98
PTPN22-207ENST00000528414 KISS1Q15726 138 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 ZNF56Q15929 161 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 C11orf71Q6IPW1 123 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 PATE2Q6UY27 113 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 ZNF71Q9NQZ8 489 aaPredicted RBP2.7□□□□□ -1.98
PTPN22-207ENST00000528414 TTC28Q96AY4 2481 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 DNAH2Q9P225 4427 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 FAM186AA6NE01 2351 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 PLXNB1O43157 2135 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 TCRBV4S1A1TA0A5B7 111 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 HLA-DPB1P04440 258 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 SCGB1C2P0DMR2 95 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 SNRPGP62308 76 aaKnown RBP2.7□□□□□ -1.98
PTPN22-207ENST00000528414 CYCSP99999 105 aaKnown RBP2.7□□□□□ -1.98
PTPN22-207ENST00000528414 FAM104BQ5XKR9 115 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 COPS9Q8WXC6 57 aa2.7□□□□□ -1.98
PTPN22-207ENST00000528414 TRGV9Q99603 122 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms