RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 PRR9Q5T870 116 aa9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 MORN3Q6PF18 240 aaPredicted RBP9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 TRAV12-2A0A075B6T6 113 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 TRAV12-3A0A0B4J271 114 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 RPL35AP18077 110 aaKnown RBP9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 GFI1BQ5VTD9 330 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 KCNIP4Q6PIL6 250 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 MUC7Q8TAX7 377 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 IMMP2LQ96T52 175 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 TUBA4BQ9H853 241 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 SRD5A3Q9H8P0 318 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 IL36BQ9NZH7 164 aa9.28□□□□□ -0.92
SSSCA1-203ENST00000526877 INSP01308 110 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 KIR3DS1Q14943 382 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 LINC01559Q495D7 138 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 TMEM88Q6PEY1 159 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 TSKUQ8WUA8 353 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 C20orf144Q9BQM9 153 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 C1QTNF4Q9BXJ3 329 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 EDA2RQ9HAV5 297 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 NAGKQ9UJ70 344 aa9.27□□□□□ -0.93
SSSCA1-203ENST00000526877 TMSB15BA0A087X1C1 80 aa9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 ZNF324O75467 553 aaPredicted RBP9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 RPL19P84098 196 aaKnown RBP9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 CASC10Q5T4H9 136 aa9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 FAM159AQ6UWV7 190 aa9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 CBLN2Q8IUK8 224 aa9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 KCNS1Q96KK3 526 aa9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 SPATA25Q9BR10 227 aa9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 GFRA4Q9GZZ7 299 aa9.26□□□□□ -0.93
SSSCA1-203ENST00000526877 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 LOC102724200A0A096LPH7 203 aaPredicted RBP9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 SMIM27A0A1W2PRY6 76 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 FAM231BA6NCW3 169 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 CA1P00915 261 aaPredicted RBP9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 MUC21Q5SSG8 566 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 CSTL1Q9H114 145 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 C11orf21Q9P2W6 132 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 XCL2Q9UBD3 114 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
SSSCA1-203ENST00000526877 DNAH7Q8WXX0 4024 aa9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 IGHV1OR15-1A0A075B7D0 117 aa9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 IGKV3D-20A0A0C4DH25 116 aa9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 APOC4P55056 127 aa9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 FAM3BP58499 235 aaPredicted RBP9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 ANXA2RQ3ZCQ2 193 aa9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 Q6ZQT7 251 aa9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 TMEM256Q8N2U0 113 aa9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 NAT8BQ9UHF3 227 aa9.24□□□□□ -0.93
SSSCA1-203ENST00000526877 TRAV9-1A0A075B6T8 112 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 KIR2DL5BA0A0G2JN68 375 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 KIR2DL5BA0A0G2JPC4 375 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 A0A1W2PPQ1 181 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 GRIFINA4D1Z8 144 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 CXCL1P09341 107 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 GZMBP10144 247 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 TCL1AP56279 114 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 KIR2DL5AQ8N109 375 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 KIR2DL5BQ8NHK3 375 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 LINC01587Q99440 93 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 NEU1Q99519 415 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 PYGO2Q9BRQ0 406 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 TMEM208Q9BTX3 173 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
SSSCA1-203ENST00000526877 HIGD1CA8MV81 97 aa9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 S100A4P26447 101 aaKnown RBP9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 ASIPP42127 132 aa9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 FOXA3P55318 350 aaPredicted RBP9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 ELOBQ15370 118 aa9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 TDRG1Q3Y452 100 aa9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 BORCS7Q96B45 105 aa9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 PGLYRP4Q96LB8 373 aa9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 RETNQ9HD89 108 aa9.22□□□□□ -0.93
SSSCA1-203ENST00000526877 CSMD3Q7Z407 3707 aa9.21□□□□□ -0.93
SSSCA1-203ENST00000526877 TRGV11A0A075B6L2 103 aa9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 RBMY1A1P0DJD3 496 aaKnown RBP9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 RBMY1CP0DJD4 496 aa9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 RBMY1FQ15415 496 aaKnown RBP9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 FER1L6-AS1Q8NA97 138 aa9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 NUP35Q8NFH5 326 aa9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 GTSF1Q8WW33 167 aa9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 LINC00467Q9BRT7 94 aa9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 TPPP3Q9BW30 176 aa9.21□□□□□ -0.94
SSSCA1-203ENST00000526877 TRBV24-1A0A075B6N3 115 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 IGHV3OR16-12A0A075B7B8 117 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 CBY3A6NI87 242 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 F2Z2F3 143 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 UBE2CO00762 179 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 GNRH2O43555 120 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 TYMSP04818 313 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 GIG44P09565 113 aaPredicted RBP9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 HTN1P15515 57 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 C1orf158Q8N1D5 194 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 YPEL4Q96NS1 127 aa9.2□□□□□ -0.94
SSSCA1-203ENST00000526877 TGIF2-C20orf24A0A0A6YYL0 155 aa9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 ARMS2P0C7Q2 107 aa9.19□□□□□ -0.94
SSSCA1-203ENST00000526877 IGLC6P0CF74 106 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms