RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 FMC1Q96HJ9 113 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 IGF2BP2-AS1Q96M15 143 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 SPACA5Q96QH8 159 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 HSD17B10Q99714 261 aaKnown RBP3.94□□□□□ -1.78
CD44-218ENST00000525469 C20orf78Q9BR46 151 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 RPP21Q9H633 154 aaKnown RBP3.94□□□□□ -1.78
CD44-218ENST00000525469 CCL28Q9NRJ3 127 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 NHP2Q9NX24 153 aaKnown RBP3.94□□□□□ -1.78
CD44-218ENST00000525469 NOTCH3Q9UM47 2321 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 BIRC6Q9NR09 4857 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 C5orf63A6NC05 138 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 C9JAW5 83 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 C3orf84H3BNL1 204 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 M0R2P5 195 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 PROP1O75360 226 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 DUSP14O95147 198 aaKnown RBP3.93□□□□□ -1.78
CD44-218ENST00000525469 NGFP01138 241 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 NPYP01303 97 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 P01737 135 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 IGHV3-9P01782 118 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 CSN3P07498 182 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 PLNP26678 52 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 RPL13AP40429 203 aaKnown RBP3.93□□□□□ -1.78
CD44-218ENST00000525469 NMUP48645 174 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 SUB1P53999 127 aaKnown RBP eCLIP3.93□□□□□ -1.78
CD44-218ENST00000525469 EDDM3BP56851 147 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 TMEM258P61165 79 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 ERVK-16P61578 105 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 DEFB121Q5J5C9 76 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 C11orf44Q8N8P7 122 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 C15orf53Q8NAA6 179 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 OR13A1Q8NGR1 328 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 OSR1Q8TAX0 266 aaPredicted RBP3.93□□□□□ -1.78
CD44-218ENST00000525469 IL1F10Q8WWZ1 152 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 NPIPB3Q92617 1050 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 MGST2Q99735 147 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 HDHD3Q9BSH5 251 aaPredicted RBP3.93□□□□□ -1.78
CD44-218ENST00000525469 RNASE7Q9H1E1 156 aaKnown RBP3.93□□□□□ -1.78
CD44-218ENST00000525469 HIGD1AQ9Y241 93 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 AMMECR1Q9Y4X0 333 aaPredicted RBP3.93□□□□□ -1.78
CD44-218ENST00000525469 HILPDAQ9Y5L2 63 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 TENM3Q9P273 2699 aa3.93□□□□□ -1.78
CD44-218ENST00000525469 IGHV3-15A0A0B4J1V0 119 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 TRBV6-1A0A0K0K1D8 114 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 TRBV7-7A0A0K0K1E9 115 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 MYMXA0A1B0GTQ4 84 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 A0A1B0GUT8 65 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 MS4A18H0YCH9 400 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 NPFFO15130 113 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 TNFSF12O43508 249 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 DPM2O94777 84 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 NDUFA7O95182 113 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 IGKV1-5P01602 117 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 APOHP02749 345 aaPredicted RBP3.92□□□□□ -1.78
CD44-218ENST00000525469 P0C879 139 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 NHLRC4P0CG21 123 aaPredicted RBP3.92□□□□□ -1.78
CD44-218ENST00000525469 LMO4P61968 165 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 MS4A18Q3C1V0 323 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 SLC25A53Q5H9E4 307 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 SH2D6Q7Z4S9 175 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 ZDHHC23Q8IYP9 409 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 C10orf126Q8N4M7 172 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 OR4C13Q8NGP0 309 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 RNF138Q8WVD3 245 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 LINC00526Q96FQ7 95 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 DUX3Q96PT4 197 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 HIST1H4GQ99525 98 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 SRXN1Q9BYN0 137 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 OR2H1Q9GZK4 316 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 NXT2Q9NPJ8 142 aaKnown RBP3.92□□□□□ -1.78
CD44-218ENST00000525469 LSM4Q9Y4Z0 139 aaKnown RBP3.92□□□□□ -1.78
CD44-218ENST00000525469 INSIG2Q9Y5U4 225 aa3.92□□□□□ -1.78
CD44-218ENST00000525469 TRBV25-1A0A075B6N4 114 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 TRAV8-2A0A0B4J237 113 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 TRAV8-4A0A0B4J246 113 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 C15orf62A8K5M9 175 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 USP17L23D6RBM5 183 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 F5H768 121 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 K7EMI3 77 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 PEX7O00628 323 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 MGST3O14880 152 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 WNT9BO14905 357 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 TRIAP1O43715 76 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 SPINK4O60575 86 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 MRPL33O75394 65 aaKnown RBP3.91□□□□□ -1.78
CD44-218ENST00000525469 IGKCP01834 107 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 CRYGDP07320 174 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 MYOD1P15172 320 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 COL8A2P25067 703 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 CXCL5P42830 114 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 ZNF134P52741 427 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 UBE2L3P68036 154 aaKnown RBP3.91□□□□□ -1.78
CD44-218ENST00000525469 MZT1Q08AG7 82 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 FXYD3Q14802 87 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 ALKBH6Q3KRA9 238 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 PAPPA-AS1Q5QFB9 102 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 TMEM170BQ5T4T1 132 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 TEX36Q5VZQ5 186 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 FAM159AQ6UWV7 190 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms