RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 HLA-DRB4X5D2U9 266 aa7.46□□□□□ -1.22
VPS13B-212ENST00000524330 IGHV4-4A0A075B6R2 117 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 FRMD6-AS1P0C7T7 363 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 INSL3P51460 131 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 ANXA2RQ3ZCQ2 193 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 GDF5OSQ5U4N7 250 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 STHQ8IWL8 128 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 SYT8Q8NBV8 401 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 CHCHD1Q96BP2 118 aaKnown RBP7.45□□□□□ -1.22
VPS13B-212ENST00000524330 FAM110AQ9BQ89 295 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 MAP6D1Q9H9H5 199 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 SELENOKQ9Y6D0 94 aa7.45□□□□□ -1.22
VPS13B-212ENST00000524330 GCN1Q92616 2671 aaKnown RBP7.45□□□□□ -1.22
VPS13B-212ENST00000524330 FASNP49327 2511 aaKnown RBP7.45□□□□□ -1.22
VPS13B-212ENST00000524330 H3BVH4 76 aa7.44□□□□□ -1.22
VPS13B-212ENST00000524330 SERF1AO75920 110 aa7.44□□□□□ -1.22
VPS13B-212ENST00000524330 SMIM17P0DL12 118 aa7.44□□□□□ -1.22
VPS13B-212ENST00000524330 CKS2P33552 79 aa7.44□□□□□ -1.22
VPS13B-212ENST00000524330 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
VPS13B-212ENST00000524330 HIST1H2BLQ99880 126 aa7.44□□□□□ -1.22
VPS13B-212ENST00000524330 MCRIP2Q9BUT9 160 aaKnown RBP7.44□□□□□ -1.22
VPS13B-212ENST00000524330 IGHV1OR15-1A0A075B7D0 117 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 TRAV12-3A0A0B4J271 114 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 A8MTW9 85 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 H3BMM0 161 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 PPP1R17O96001 155 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 IGKV3-20P01619 116 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 CD7P09564 240 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 AMTP48728 403 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 TDRG1Q3Y452 100 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 MUC21Q5SSG8 566 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 PRR9Q5T870 116 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 GFI1BQ5VTD9 330 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 RNASEKQ6P5S7 137 aaKnown RBP7.43□□□□□ -1.22
VPS13B-212ENST00000524330 FA2HQ7L5A8 372 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 PRSS3P2Q8NHM4 247 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 PRELID3AQ96N28 172 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 AP1S3Q96PC3 154 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 C12orf57Q99622 126 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 TIMM8BQ9Y5J9 83 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-212ENST00000524330 MAP1AP78559 2803 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-212ENST00000524330 TLN2Q9Y4G6 2542 aa7.43□□□□□ -1.22
VPS13B-212ENST00000524330 SONP18583 2426 aaKnown RBP7.42□□□□□ -1.22
VPS13B-212ENST00000524330 MYO9AB2RTY4 2548 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 KNCNA6PVL3 124 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 ZNF324O75467 553 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-212ENST00000524330 INSP01308 110 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 IGLV1-51P01701 117 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 DEFB1P60022 68 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 SSTP61278 116 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 S100A12P80511 92 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 SPINK13Q1W4C9 94 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 C9orf66Q5T8R8 295 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 TMEM256Q8N2U0 113 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 MRAP2Q96G30 205 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 MAP1LC3AQ9H492 121 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 DPH3P1Q9H4G8 78 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 C11orf21Q9P2W6 132 aa7.42□□□□□ -1.22
VPS13B-212ENST00000524330 ITPR2Q14571 2701 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 ZANQ9Y493 2812 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 ADARB2-AS1A8MUL3 147 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 LINC00614P0C842 121 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 IQCJQ1A5X6 159 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 MRPL51Q4U2R6 128 aaKnown RBP7.41□□□□□ -1.22
VPS13B-212ENST00000524330 NIT1Q86X76 327 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 OR10AG1Q8NH19 301 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 C1QTNF4Q9BXJ3 329 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 ZNF256Q9Y2P7 627 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-212ENST00000524330 U3KQK5 164 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 HECTD1Q9ULT8 2610 aa7.41□□□□□ -1.22
VPS13B-212ENST00000524330 MUC21A0A0G2JKD1 596 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 MUC21A0A140T8X8 626 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 CBY3A6NI87 242 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 D6R8Y8 96 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 M0R2Z0 102 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 M0R381 172 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 ZNF415Q09FC8 603 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 JOSD1Q15040 202 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-212ENST00000524330 MORN3Q6PF18 240 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-212ENST00000524330 AMTNQ6UX39 209 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 LINC00467Q9BRT7 94 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 NXT2Q9NPJ8 142 aaKnown RBP7.4□□□□□ -1.22
VPS13B-212ENST00000524330 SCRT2Q9NQ03 307 aa7.4□□□□□ -1.22
VPS13B-212ENST00000524330 VPS13CQ709C8 3753 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 ACANP16112 2415 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 TRAV12-2A0A075B6T6 113 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 IFITM10A6NMD0 228 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 GNRH2O43555 120 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 GTSCR1Q86UQ5 136 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-212ENST00000524330 LINC00482Q8N8I6 264 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 LINC01587Q99440 93 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 TMEM208Q9BTX3 173 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 AP5S1Q9NUS5 200 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 HSPB8Q9UJY1 196 aa7.39□□□□□ -1.23
VPS13B-212ENST00000524330 IGHV3-16A0A0C4DH30 117 aa7.38□□□□□ -1.23
VPS13B-212ENST00000524330 C20orf202A1L168 122 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms