RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TMEM189A5PLL7 270 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 GNRH2O43555 120 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 SNAPINO95295 136 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 C15orf54Q8N8G6 183 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 TMEM208Q9BTX3 173 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 RPP21Q9H633 154 aaKnown RBP9.72□□□□□ -0.85
CLK4-210ENST00000522136 RPS10P5Q9NQ39 176 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 B4DEV8 164 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 MT-ND4LP03901 98 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 S100A1P23297 94 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 FAM159AQ6UWV7 190 aa9.72□□□□□ -0.85
CLK4-210ENST00000522136 IGHV1OR15-1A0A075B7D0 117 aa9.71□□□□□ -0.86
CLK4-210ENST00000522136 MRAPQ8TCY5 172 aa9.71□□□□□ -0.86
CLK4-210ENST00000522136 C20orf144Q9BQM9 153 aa9.71□□□□□ -0.86
CLK4-210ENST00000522136 H7BYZ3 331 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 RHEBQ15382 184 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 UBE2CO00762 179 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 AZU1P20160 251 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
CLK4-210ENST00000522136 SBSPONQ8IVN8 264 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 ANAPC16Q96DE5 110 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 PYGO2Q9BRQ0 406 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 RETNQ9HD89 108 aa9.7□□□□□ -0.86
CLK4-210ENST00000522136 NBEAL2Q6ZNJ1 2754 aa9.69□□□□□ -0.86
CLK4-210ENST00000522136 CBY3A6NI87 242 aa9.69□□□□□ -0.86
CLK4-210ENST00000522136 SPRY2O43597 315 aa9.69□□□□□ -0.86
CLK4-210ENST00000522136 TYMSP04818 313 aa9.69□□□□□ -0.86
CLK4-210ENST00000522136 TMEM256Q8N2U0 113 aa9.69□□□□□ -0.86
CLK4-210ENST00000522136 PPP1R2P9O14990 202 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 TCL1AP56279 114 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 DEFA6Q01524 100 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 TDRG1Q3Y452 100 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 RCHY1Q96PM5 261 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 SCO1O75880 301 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 Q6ZWC4 215 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 GTSF1Q8WW33 167 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 RNF183Q96D59 192 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
CLK4-210ENST00000522136 X6R8D5 127 aa9.68□□□□□ -0.86
CLK4-210ENST00000522136 A0A087WWC5 75 aa9.67□□□□□ -0.86
CLK4-210ENST00000522136 A8MWL6 223 aa9.67□□□□□ -0.86
CLK4-210ENST00000522136 TSKUQ8WUA8 353 aa9.67□□□□□ -0.86
CLK4-210ENST00000522136 TPPP3Q9BW30 176 aa9.67□□□□□ -0.86
CLK4-210ENST00000522136 CTDSP1Q9GZU7 261 aa9.67□□□□□ -0.86
CLK4-210ENST00000522136 IGHV3-16A0A0C4DH30 117 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 RPS20P60866 119 aaKnown RBP9.66□□□□□ -0.86
CLK4-210ENST00000522136 CT83Q5H943 113 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 OR11H2Q8NH07 326 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 NEU1Q99519 415 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 OVOL2Q9BRP0 275 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 LINC00467Q9BRT7 94 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 IL36BQ9NZH7 164 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 MUC4Q99102 2169 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 H3BVH4 76 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
CLK4-210ENST00000522136 S100A4P26447 101 aaKnown RBP9.66□□□□□ -0.86
CLK4-210ENST00000522136 ASIPP42127 132 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 FAM3BP58499 235 aaPredicted RBP9.66□□□□□ -0.86
CLK4-210ENST00000522136 SSTP61278 116 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 TMEM88Q6PEY1 159 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 GSN-AS1Q9NRJ2 163 aa9.66□□□□□ -0.86
CLK4-210ENST00000522136 SMIM27A0A1W2PRY6 76 aa9.65□□□□□ -0.86
CLK4-210ENST00000522136 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
CLK4-210ENST00000522136 ARMS2P0C7Q2 107 aa9.65□□□□□ -0.86
CLK4-210ENST00000522136 RRN3P1Q2M238 152 aa9.65□□□□□ -0.86
CLK4-210ENST00000522136 CBLN2Q8IUK8 224 aa9.65□□□□□ -0.86
CLK4-210ENST00000522136 PGLYRP4Q96LB8 373 aa9.65□□□□□ -0.86
CLK4-210ENST00000522136 URGCP-MRPS24S4R325 110 aa9.65□□□□□ -0.86
CLK4-210ENST00000522136 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 HIGD1CA8MV81 97 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 IGLC6P0CF74 106 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 LYZL1Q6UWQ5 148 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 FER1L6-AS1Q8NA97 138 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 C11orf72Q8NBR9 251 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 RNASE8Q8TDE3 154 aaKnown RBP9.64□□□□□ -0.87
CLK4-210ENST00000522136 TMEM242Q9NWH2 141 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 DEFB4AO15263 64 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 SPINK4O60575 86 aa9.64□□□□□ -0.87
CLK4-210ENST00000522136 PLAC8L1A1L4L8 177 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 CXCL1P09341 107 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 DNLZQ5SXM8 178 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 NUP35Q8NFH5 326 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 TMEM263Q8WUH6 116 aaKnown RBP9.63□□□□□ -0.87
CLK4-210ENST00000522136 GFRA4Q9GZZ7 299 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 EMP1P54849 157 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 FOXA3P55318 350 aaPredicted RBP9.63□□□□□ -0.87
CLK4-210ENST00000522136 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 TP53TG1Q9Y2A0 90 aa9.63□□□□□ -0.87
CLK4-210ENST00000522136 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
CLK4-210ENST00000522136 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
CLK4-210ENST00000522136 TM2D3Q9BRN9 247 aa9.62□□□□□ -0.87
CLK4-210ENST00000522136 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
CLK4-210ENST00000522136 NAT8BQ9UHF3 227 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms