RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 PYGO2Q9BRQ0 406 aa6.55□□□□□ -1.36
CSMD1-208ENST00000520561 SMCO4Q9NRQ5 59 aa6.55□□□□□ -1.36
CSMD1-208ENST00000520561 IL36BQ9NZH7 164 aa6.55□□□□□ -1.36
CSMD1-208ENST00000520561 AGRNO00468 2067 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 TRRAPQ9Y4A5 3859 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 TRGV11A0A075B6L2 103 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 IGHV3OR16-12A0A075B7B8 117 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 IGKV3D-20A0A0C4DH25 116 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 CXorf65A6NEN9 183 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 CBY3A6NI87 242 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 A8MZ25 164 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 UBE2CO00762 179 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 TYMSP04818 313 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 RBMY1A1P0DJD3 496 aaKnown RBP6.54□□□□□ -1.36
CSMD1-208ENST00000520561 RBMY1CP0DJD4 496 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 S100A4P26447 101 aaKnown RBP6.54□□□□□ -1.36
CSMD1-208ENST00000520561 TCL1AP56279 114 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 RBMY1FQ15415 496 aaKnown RBP6.54□□□□□ -1.36
CSMD1-208ENST00000520561 Q6ZQT7 251 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 CBLN2Q8IUK8 224 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 BORCS7Q96B45 105 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 IMMP2LQ96T52 175 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 NEU1Q99519 415 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 TPPP3Q9BW30 176 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 GFRA4Q9GZZ7 299 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 C11orf21Q9P2W6 132 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 NAT8BQ9UHF3 227 aa6.54□□□□□ -1.36
CSMD1-208ENST00000520561 A0A1W2PPQ1 181 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 SMIM27A0A1W2PRY6 76 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 GRIFINA4D1Z8 144 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 FAM231BA6NCW3 169 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 SCO1O75880 301 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 GIG44P09565 113 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-208ENST00000520561 GZMBP10144 247 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 ZNF415Q09FC8 603 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 TDRG1Q3Y452 100 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 TMEM88Q6PEY1 159 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 FER1L6-AS1Q8NA97 138 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 BTF3L4Q96K17 158 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 LINC00467Q9BRT7 94 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 URGCP-MRPS24S4R325 110 aa6.53□□□□□ -1.36
CSMD1-208ENST00000520561 TRAV9-1A0A075B6T8 112 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 HIGD1CA8MV81 97 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 H3BVH4 76 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 PRB2P02812 416 aaPredicted RBP6.52□□□□□ -1.37
CSMD1-208ENST00000520561 FRMD6-AS1P0C7T7 363 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 MED14OSP0DP75 135 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 HTN1P15515 57 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 DEFB135Q30KP9 77 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 C1orf158Q8N1D5 194 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 PGLYRP4Q96LB8 373 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 RCHY1Q96PM5 261 aa6.52□□□□□ -1.37
CSMD1-208ENST00000520561 VWFP04275 2813 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 F2Z2F3 143 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 GNRH2O43555 120 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 IGLC6P0CF74 106 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 CTRLP40313 264 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 FAM3BP58499 235 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-208ENST00000520561 RRN3P1Q2M238 152 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 DNLZQ5SXM8 178 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 ZNF705AQ6ZN79 300 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-208ENST00000520561 CSNK1G2-AS1Q8NCQ2 148 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 GTSF1Q8WW33 167 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 TP53TG3Q9ULZ0 132 aa6.51□□□□□ -1.37
CSMD1-208ENST00000520561 TIMM8BQ9Y5J9 83 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-208ENST00000520561 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 SNURFLB1AK76 121 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 K7EIL1 84 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 SNAI2O43623 268 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 OR5AL1P0C617 328 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 ARMS2P0C7Q2 107 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 FOXA3P55318 350 aaPredicted RBP6.5□□□□□ -1.37
CSMD1-208ENST00000520561 CACNG7P62955 275 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 SPANXN1Q5VSR9 72 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 Q6ZWC4 215 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 ATP5L2Q7Z4Y8 100 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 TMEM263Q8WUH6 116 aaKnown RBP6.5□□□□□ -1.37
CSMD1-208ENST00000520561 C16orf74Q96GX8 76 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
CSMD1-208ENST00000520561 TGIF2-C20orf24A0A0A6YYL0 155 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 A0A1B0GUT8 65 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 A0A1B0GW15 77 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 SMIM9A6NGZ8 99 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 SPINK4O60575 86 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 S100A8P05109 93 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 RNASE3P12724 160 aaKnown RBP6.49□□□□□ -1.37
CSMD1-208ENST00000520561 RIGQ13278 110 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 ELOBQ15370 118 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 DEFB121Q5J5C9 76 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 MRPL54Q6P161 138 aaKnown RBP6.49□□□□□ -1.37
CSMD1-208ENST00000520561 LYZL1Q6UWQ5 148 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 ZNF493Q6ZR52 646 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 ZFP82Q8N141 532 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 SYT8Q8NBV8 401 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 MRAPQ8TCY5 172 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 RNASE8Q8TDE3 154 aaKnown RBP6.49□□□□□ -1.37
CSMD1-208ENST00000520561 RNF183Q96D59 192 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 C9orf85Q96MD7 179 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 GSN-AS1Q9NRJ2 163 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms