RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 HIST1H2BAQ96A08 127 aa13.37□□□□□ -0.27
CHMP7-204ENST00000519414 C20orf144Q9BQM9 153 aa13.37□□□□□ -0.27
CHMP7-204ENST00000519414 KRTAP1-5Q9BYS1 174 aa13.37□□□□□ -0.27
CHMP7-204ENST00000519414 LENEPQ9Y5L5 61 aa13.37□□□□□ -0.27
CHMP7-204ENST00000519414 TRAV26-1A0A087WT03 109 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 FBLL1A6NHQ2 334 aaKnown RBP13.36□□□□□ -0.27
CHMP7-204ENST00000519414 KLLNB2CW77 178 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 PEX7O00628 323 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 CCL20P78556 96 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 GFI1BQ5VTD9 330 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 LINC00612Q8N6U2 182 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 TMEM75Q8N9X5 138 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 UPK3BQ9BT76 320 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 GNG13Q9P2W3 67 aa13.36□□□□□ -0.27
CHMP7-204ENST00000519414 TRAV8-1A0A0A6YYK1 113 aa13.35□□□□□ -0.27
CHMP7-204ENST00000519414 A0A1W2PPQ1 181 aa13.35□□□□□ -0.27
CHMP7-204ENST00000519414 F6UZH7 168 aa13.35□□□□□ -0.27
CHMP7-204ENST00000519414 IFNA1P01562 189 aa13.35□□□□□ -0.27
CHMP7-204ENST00000519414 BTF3P20290 206 aaKnown RBP13.35□□□□□ -0.27
CHMP7-204ENST00000519414 TEX261Q6UWH6 196 aa13.35□□□□□ -0.27
CHMP7-204ENST00000519414 ZFAND2AQ8N6M9 145 aa13.35□□□□□ -0.27
CHMP7-204ENST00000519414 C7orf71A4D174 169 aa13.34□□□□□ -0.27
CHMP7-204ENST00000519414 J3KRW8 73 aa13.34□□□□□ -0.27
CHMP7-204ENST00000519414 KRTAP10-2P60368 255 aa13.34□□□□□ -0.27
CHMP7-204ENST00000519414 KIR3DS1Q14943 382 aa13.34□□□□□ -0.27
CHMP7-204ENST00000519414 TXNDC17Q9BRA2 123 aa13.34□□□□□ -0.27
CHMP7-204ENST00000519414 NDFIP1Q9BT67 221 aa13.34□□□□□ -0.27
CHMP7-204ENST00000519414 A0A0J9YY99 117 aa13.33□□□□□ -0.28
CHMP7-204ENST00000519414 H3BNG1 76 aa13.33□□□□□ -0.28
CHMP7-204ENST00000519414 GPX1P07203 203 aa13.33□□□□□ -0.28
CHMP7-204ENST00000519414 TAGLN2P37802 199 aaKnown RBP13.33□□□□□ -0.28
CHMP7-204ENST00000519414 FLI1Q01543 452 aaPredicted RBP13.33□□□□□ -0.28
CHMP7-204ENST00000519414 ESRGQ1W209 222 aa13.33□□□□□ -0.28
CHMP7-204ENST00000519414 DNAH5Q8TE73 4624 aa13.33□□□□□ -0.28
CHMP7-204ENST00000519414 IGLV2-11P01706 119 aa13.32□□□□□ -0.28
CHMP7-204ENST00000519414 BCL2P10415 239 aa13.32□□□□□ -0.28
CHMP7-204ENST00000519414 HOXA5P20719 270 aa13.32□□□□□ -0.28
CHMP7-204ENST00000519414 ZNF680Q8NEM1 530 aa13.32□□□□□ -0.28
CHMP7-204ENST00000519414 LYPD6BQ8NI32 183 aa13.32□□□□□ -0.28
CHMP7-204ENST00000519414 PSG8Q9UQ74 426 aa13.32□□□□□ -0.28
CHMP7-204ENST00000519414 MRPS16Q9Y3D3 137 aaKnown RBP13.32□□□□□ -0.28
CHMP7-204ENST00000519414 TRAV12-3A0A0B4J271 114 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 GAGE12BA1L429 117 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 GAGE7O76087 117 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 GAGE12FP0CL80 117 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 GAGE12GP0CL81 117 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 GAGE12IP0CL82 117 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 RNASE4P34096 147 aaKnown RBP13.31□□□□□ -0.28
CHMP7-204ENST00000519414 BTN1A1Q13410 526 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 PRR9Q5T870 116 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 SGK494Q96LW2 274 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 TREM1Q9NP99 234 aa13.31□□□□□ -0.28
CHMP7-204ENST00000519414 APOBP04114 4563 aaKnown RBP13.3□□□□□ -0.28
CHMP7-204ENST00000519414 SNURFLB1AK76 121 aa13.3□□□□□ -0.28
CHMP7-204ENST00000519414 AKR1C3P42330 323 aa13.3□□□□□ -0.28
CHMP7-204ENST00000519414 MEF2BQ02080 365 aaPredicted RBP13.3□□□□□ -0.28
CHMP7-204ENST00000519414 PRNTQ86SH4 94 aa13.3□□□□□ -0.28
CHMP7-204ENST00000519414 Q86TA4 180 aa13.3□□□□□ -0.28
CHMP7-204ENST00000519414 FMC1Q96HJ9 113 aa13.3□□□□□ -0.28
CHMP7-204ENST00000519414 TRAV34A0A0B4J273 112 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 SCO2A0A1W2PP80 73 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 UBE2G1P62253 170 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 SAPCD1Q5SSQ6 148 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 TVP23CQ96ET8 276 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 LINC00479Q96M42 142 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 PYGO2Q9BRQ0 406 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 VAX2Q9UIW0 290 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 KLF12Q9Y4X4 402 aa13.29□□□□□ -0.28
CHMP7-204ENST00000519414 TRBV6-1A0A0K0K1D8 114 aa13.28□□□□□ -0.28
CHMP7-204ENST00000519414 ZNF324O75467 553 aaPredicted RBP13.28□□□□□ -0.28
CHMP7-204ENST00000519414 Q6AWC8 147 aa13.28□□□□□ -0.28
CHMP7-204ENST00000519414 C11orf52Q96A22 123 aa13.28□□□□□ -0.28
CHMP7-204ENST00000519414 PDE6DO43924 150 aa13.27□□□□□ -0.29
CHMP7-204ENST00000519414 S100A9P06702 114 aaKnown RBP13.27□□□□□ -0.29
CHMP7-204ENST00000519414 DAZ2Q13117 558 aaKnown RBP13.27□□□□□ -0.29
CHMP7-204ENST00000519414 TMEM183BQ1AE95 376 aa13.27□□□□□ -0.29
CHMP7-204ENST00000519414 C8orf49Q96NF6 230 aa13.26□□□□□ -0.29
CHMP7-204ENST00000519414 LINC00467Q9BRT7 94 aa13.26□□□□□ -0.29
CHMP7-204ENST00000519414 ZFP30Q9Y2G7 519 aa13.26□□□□□ -0.29
CHMP7-204ENST00000519414 LINC00315P59091 139 aa13.25□□□□□ -0.29
CHMP7-204ENST00000519414 SMUG1Q53HV7 270 aa13.25□□□□□ -0.29
CHMP7-204ENST00000519414 Q6ZTI0 123 aa13.25□□□□□ -0.29
CHMP7-204ENST00000519414 A0A096LPF7 62 aa13.24□□□□□ -0.29
CHMP7-204ENST00000519414 TRAV21A0A0B4J279 112 aa13.24□□□□□ -0.29
CHMP7-204ENST00000519414 RBFOX3A6NFN3 312 aa13.24□□□□□ -0.29
CHMP7-204ENST00000519414 RGS13O14921 159 aa13.24□□□□□ -0.29
CHMP7-204ENST00000519414 LTAP01374 205 aa13.24□□□□□ -0.29
CHMP7-204ENST00000519414 VSIG2Q96IQ7 327 aa13.24□□□□□ -0.29
CHMP7-204ENST00000519414 C18orf15Q96N68 181 aa13.24□□□□□ -0.29
CHMP7-204ENST00000519414 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
CHMP7-204ENST00000519414 EPM2AB3EWF7 344 aa13.23□□□□□ -0.29
CHMP7-204ENST00000519414 GCGP01275 180 aa13.23□□□□□ -0.29
CHMP7-204ENST00000519414 ZNF506Q5JVG8 444 aa13.23□□□□□ -0.29
CHMP7-204ENST00000519414 Q6ZRN7 208 aaPredicted RBP13.23□□□□□ -0.29
CHMP7-204ENST00000519414 EIF4E3Q8N5X7 224 aaKnown RBP13.23□□□□□ -0.29
CHMP7-204ENST00000519414 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
CHMP7-204ENST00000519414 FAM210AQ96ND0 272 aa13.23□□□□□ -0.29
CHMP7-204ENST00000519414 PGPEP1Q9NXJ5 209 aa13.23□□□□□ -0.29
CHMP7-204ENST00000519414 TRGV2A0A075B6R0 118 aa13.22□□□□□ -0.29
CHMP7-204ENST00000519414 PFN1P07737 140 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms