RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 KAAG1Q9UBP8 84 aa1.66□□□□□ -2.14
HERC4-215ENST00000515753 NDUFAF1Q9Y375 327 aa1.66□□□□□ -2.14
HERC4-215ENST00000515753 CNTRLQ7Z7A1 2325 aa1.66□□□□□ -2.14
HERC4-215ENST00000515753 DOCK10Q96BY6 2186 aa1.65□□□□□ -2.14
HERC4-215ENST00000515753 IGKV1D-43A0A0B4J1Z2 117 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 LOC105371267A0A1B0GV96 52 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 MAP1LC3B2A6NCE7 125 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 GGT3PA6NGU5 568 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 CPSF4LA6NMK7 179 aaKnown RBP1.65□□□□□ -2.15
HERC4-215ENST00000515753 IQCF6A8MYZ5 107 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 C3orf84H3BNL1 204 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 M0R1W7 72 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 NPFFO15130 113 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 APOA2P02652 100 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 SHBGP04278 402 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 CD14P08571 375 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 TSPAN19P0C672 248 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 HRES1P13985 223 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 PSMB8P28062 276 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 ATP5G3P48201 142 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 EMP1P54849 157 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 SMIM11AP58511 58 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 ARPC4P59998 168 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 MEF2BQ02080 365 aaPredicted RBP1.65□□□□□ -2.15
HERC4-215ENST00000515753 OR8B8Q15620 311 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 PRR9Q5T870 116 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 RPL13AP3Q6NVV1 102 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 TOMM20LQ6UXN7 152 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 BRD3OSQ6XYD6 125 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 ZNF705AQ6ZN79 300 aaPredicted RBP1.65□□□□□ -2.15
HERC4-215ENST00000515753 ARPINQ7Z6K5 226 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 NDUFA11Q86Y39 141 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 DYNAPQ8N1N2 210 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 NUP35Q8NFH5 326 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 OR8J3Q8NGG0 315 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 OR10D4PQ8NGN7 298 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 OR10K1Q8NGX5 313 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 TTTY13Q9BZ97 58 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 MAP1LC3BQ9GZQ8 125 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 C8orf4Q9NR00 106 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 SS18L2Q9UHA2 77 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 HSPE1-MOB4S4R3N1 261 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 NF1P21359 2839 aa1.65□□□□□ -2.15
HERC4-215ENST00000515753 INTS1Q8N201 2190 aaKnown RBP1.65□□□□□ -2.15
HERC4-215ENST00000515753 IGKV1D-17A0A075B6S4 117 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 BBIP1A8MTZ0 92 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 M0QZK8 103 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 KPNA4O00629 521 aaPredicted RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 GNRH2O43555 120 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 TPST1O60507 370 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 IGHV3-7P01780 117 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 ZNF728P0DKX0 622 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 NFYAP23511 347 aaPredicted RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 S100A4P26447 101 aaKnown RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 HLA-DMBP28068 263 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 BRS3P32247 399 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 ZNF80P51504 273 aaPredicted RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 DYNLT3P51808 116 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 CAV3P56539 151 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 PIGPP57054 158 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 RAB4BP61018 213 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 YPEL3P61236 119 aaPredicted RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 SELENOWP63302 87 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 RHEBQ15382 184 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 DEFB121Q5J5C9 76 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 OR2T2Q6IF00 324 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 LCA10Q71F78 164 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 TRAPPC6BQ86SZ2 158 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 LHFPL1Q86WI0 220 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 CLVS1Q8IUQ0 354 aaPredicted RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 C10orf126Q8N4M7 172 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 LINC00471Q8N535 108 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 FAM24BQ8N5W8 94 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 OR4X2Q8NGF9 303 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 OR9Q1Q8NGQ5 310 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 OR13D1Q8NGV5 346 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 PLEKHB2Q96CS7 222 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 TEX37Q96LM6 180 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 GPX7Q96SL4 187 aaPredicted RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 CGREF1Q99674 301 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 TM2D3Q9BRN9 247 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 RTL8AQ9BWD3 113 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 ZNF471Q9BX82 626 aaPredicted RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 TUBA4BQ9H853 241 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 SLC39A9Q9NUM3 307 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 MRPL16Q9NX20 251 aaKnown RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 RASL12Q9NYN1 266 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 CCDC167Q9P0B6 97 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 TP73-AS1Q9UF72 201 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 LAMTOR3Q9UHA4 124 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 PSORS1C2Q9UIG4 136 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 BAIAP2Q9UQB8 552 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 HSPB11Q9Y547 144 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 MPC1Q9Y5U8 109 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 ITPR3Q14573 2671 aa1.64□□□□□ -2.15
HERC4-215ENST00000515753 SETD2Q9BYW2 2564 aaPredicted RBP1.64□□□□□ -2.15
HERC4-215ENST00000515753 MDC1Q14676 2089 aaKnown RBP1.63□□□□□ -2.15
HERC4-215ENST00000515753 CACNA1CQ13936 2221 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 LRBAP50851 2863 aa1.63□□□□□ -2.15
HERC4-215ENST00000515753 JMJD1CQ15652 2540 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms